RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 LRRC41Q15345 812 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 ZRSR1Q15695 479 aaKnown RBP18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 UTP14CQ5TAP6 766 aaKnown RBP18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 POTEBQ6S5H4 581 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 USP49Q70CQ1 688 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 ATP8B4Q8TF62 1192 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 C16orf70Q9BSU1 422 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 TMEM106CQ9BVX2 250 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 SEZ6LQ9BYH1 1024 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 TUT1Q9H6E5 874 aaKnown RBP18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 ANKEF1Q9NU02 776 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 DDX19AQ9NUU7 478 aaKnown RBP18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 OGDHLQ9ULD0 1010 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 KIAA1024Q9UPX6 916 aa18.96■□□□□ 0.63
SCAMP4-211ENST00000588907 POTEFA5A3E0 1075 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 POLR2DO15514 142 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 OATP04181 439 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 MYL3P08590 195 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 YWHABP31946 246 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 NDUFA8P51970 172 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 GRB10Q13322 594 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 KANK3Q6NY19 840 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 POTEGQ6S5H5 508 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 EXOC8Q8IYI6 725 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 CEP57L1Q8IYX8 460 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 ANKLE1Q8NAG6 615 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 TIGD1Q96MW7 591 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 PCYT2Q99447 389 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 LRRC27Q9C0I9 530 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 CRISPLD2Q9H0B8 497 aa18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 HOOK1Q9UJC3 728 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 DBR1Q9UK59 544 aaKnown RBP18.95■□□□□ 0.62
SCAMP4-211ENST00000588907 HBP1O60381 514 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 KINO60870 393 aaKnown RBP18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 GADD45BO75293 160 aaPredicted RBP18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 SGPL1O95470 568 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 EYA4O95677 639 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 ZNF286BP0CG31 522 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 PTGS1P23219 599 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 BEX3Q00994 111 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 AMPD3Q01432 767 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 UGCGQ16739 394 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 CCSAPQ6IQ19 270 aaPredicted RBP18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 FMR1NBQ8N0W7 255 aaPredicted RBP18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 PNMA5Q96PV4 448 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 KCND2Q9NZV8 630 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 TELO2Q9Y4R8 837 aa18.94■□□□□ 0.62
SCAMP4-211ENST00000588907 COL1A2P08123 1366 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 MYADML2A6NDP7 307 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 ZNF202O95125 648 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 MYL1P05976 194 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 ASGR1P07306 291 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 SLFN14P0C7P3 912 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 GJA8P48165 433 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 E2F4Q16254 413 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 KCNA10Q16322 511 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 SKOR2Q2VWA4 1001 aaPredicted RBP18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 TRIM50Q86XT4 487 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 PDILTQ8N807 584 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 U2AF1L4Q8WU68 220 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 LARP4BQ92615 738 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 RAD54LQ92698 747 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 DHX58Q96C10 678 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 GLT1D1Q96MS3 346 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 NIFKQ9BYG3 293 aaKnown RBP18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 TNMDQ9H2S6 317 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 GOLPH3LQ9H4A5 285 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 SEPT9Q9UHD8 586 aaPredicted RBP18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 TRPC6Q9Y210 931 aa18.93■□□□□ 0.62
SCAMP4-211ENST00000588907 HAS3O00219 553 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 ZNF862O60290 1169 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 MYCNP04198 464 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 ACLYP53396 1101 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 MFSD10Q14728 455 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 PLCB4Q15147 1175 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 ZNF484Q5JVG2 852 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 SV2BQ7L1I2 683 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 ELOA2Q8IYF1 753 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 CNNM3Q8NE01 707 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 ENGASEQ8NFI3 743 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 JPH2Q9BR39 696 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 WRAP73Q9P2S5 460 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 PHF24Q9UPV7 400 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 SCN10AQ9Y5Y9 1956 aa18.92■□□□□ 0.62
SCAMP4-211ENST00000588907 ARHGEF35A5YM69 484 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 RRN3P2A6NIE6 340 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 MYCP01106 439 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 TFRCP02786 760 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 GNAT1P11488 350 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 MARK3P27448 753 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 RARRES1P49788 294 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 PSEN2P49810 448 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 SNW1Q13573 536 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 ECM1Q16610 540 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 KIAA0753Q2KHM9 967 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 TPRNQ4KMQ1 711 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 NFRKBQ6P4R8 1299 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 SYT2Q8N9I0 419 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 KAT2BQ92831 832 aa18.91■□□□□ 0.62
SCAMP4-211ENST00000588907 TIPINQ9BVW5 301 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms