RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CD4P01730 458 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 MARCKSP29966 332 aaPredicted RBP24.31■■□□□ 1.48
SNX1-206ENST00000559389 TLE2Q04725 743 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 CTTNQ14247 550 aaKnown RBP24.31■■□□□ 1.48
SNX1-206ENST00000559389 GDF6Q6KF10 455 aaPredicted RBP24.31■■□□□ 1.48
SNX1-206ENST00000559389 C4orf19Q8IY42 314 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 LMBR1Q8WVP7 490 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 AK8Q96MA6 479 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 TUFT1Q9NNX1 390 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 CHMP5Q9NZZ3 219 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 STK24Q9Y6E0 443 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 NRCAMQ92823 1304 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 ARID2Q68CP9 1835 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 C17orf102A2RUQ5 167 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 SPTLC2O15270 562 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 MED24O75448 989 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 SLITRK3O94933 977 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 LYPLA2O95372 231 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 SPATA31C1P0DKV0 1188 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 INSRRP14616 1297 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 KRT85P78386 507 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 ADAM17P78536 824 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 GRIK4Q16099 956 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 XKR3Q5GH77 459 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 SNX29Q8TEQ0 813 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 TNPO1Q92973 898 aaKnown RBP24.3■■□□□ 1.48
SNX1-206ENST00000559389 CTAGE1Q96RT6 745 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 POLR3CQ9BUI4 534 aaPredicted RBP24.3■■□□□ 1.48
SNX1-206ENST00000559389 ZSWIM4Q9H7M6 989 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 TRMT13Q9NUP7 481 aaKnown RBP24.3■■□□□ 1.48
SNX1-206ENST00000559389 SETD4Q9NVD3 440 aa24.3■■□□□ 1.48
SNX1-206ENST00000559389 SRPRBQ9Y5M8 271 aaKnown RBP24.3■■□□□ 1.48
SNX1-206ENST00000559389 DCDC2CA8MYV0 355 aa24.29■■□□□ 1.48
SNX1-206ENST00000559389 TLR3O15455 904 aaKnown RBP24.29■■□□□ 1.48
SNX1-206ENST00000559389 PPP6R2O75170 966 aa24.29■■□□□ 1.48
SNX1-206ENST00000559389 RPA1P27694 616 aa24.29■■□□□ 1.48
SNX1-206ENST00000559389 LONP1P36776 959 aaKnown RBP24.29■■□□□ 1.48
SNX1-206ENST00000559389 CATSPER3Q86XQ3 398 aa24.29■■□□□ 1.48
SNX1-206ENST00000559389 TPH2Q8IWU9 490 aa24.29■■□□□ 1.48
SNX1-206ENST00000559389 KRI1Q8N9T8 703 aaKnown RBP24.29■■□□□ 1.48
SNX1-206ENST00000559389 KCNG4Q8TDN1 519 aa24.29■■□□□ 1.48
SNX1-206ENST00000559389 MMTAG2Q9BU76 263 aaKnown RBP24.29■■□□□ 1.48
SNX1-206ENST00000559389 TRPV6Q9H1D0 765 aa24.29■■□□□ 1.48
SNX1-206ENST00000559389 SEPT9Q9UHD8 586 aaPredicted RBP24.29■■□□□ 1.48
SNX1-206ENST00000559389 ZBTB42B2RXF5 422 aa24.28■■□□□ 1.48
SNX1-206ENST00000559389 GNAT1P11488 350 aa24.28■■□□□ 1.48
SNX1-206ENST00000559389 CCT6AP40227 531 aaKnown RBP24.28■■□□□ 1.48
SNX1-206ENST00000559389 FAAP100Q0VG06 881 aa24.28■■□□□ 1.48
SNX1-206ENST00000559389 MBLAC1A4D2B0 266 aaPredicted RBP24.27■■□□□ 1.48
SNX1-206ENST00000559389 TMEM150BA6NC51 233 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 RRN3P2A6NIE6 340 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 CLTBP09497 229 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 NCLP19338 710 aaKnown RBP24.27■■□□□ 1.48
SNX1-206ENST00000559389 MUTP22033 750 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 CDC25AP30304 524 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 ZNF200P98182 395 aaPredicted RBP24.27■■□□□ 1.48
SNX1-206ENST00000559389 PTGISQ16647 500 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 ZNF484Q5JVG2 852 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 MARCH8Q5T0T0 291 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 KRT79Q5XKE5 535 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 POTEGQ6S5H5 508 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 ANO5Q75V66 913 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 TRMT1LQ7Z2T5 733 aaKnown RBP24.27■■□□□ 1.48
SNX1-206ENST00000559389 C7orf61Q8IZ16 206 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 TRAPPC12Q8WVT3 735 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 NIFKQ9BYG3 293 aaKnown RBP24.27■■□□□ 1.48
SNX1-206ENST00000559389 CSRNP2Q9H175 543 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 PDLIM7Q9NR12 457 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 NRBP2Q9NSY0 501 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 RCOR1Q9UKL0 485 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 TBX21Q9UL17 535 aa24.27■■□□□ 1.48
SNX1-206ENST00000559389 YWHABP31946 246 aaKnown RBP24.26■■□□□ 1.47
SNX1-206ENST00000559389 IGBP1P78318 339 aa24.26■■□□□ 1.47
SNX1-206ENST00000559389 TARBP2Q15633 366 aaKnown RBP24.26■■□□□ 1.47
SNX1-206ENST00000559389 PLA2G4FQ68DD2 849 aa24.26■■□□□ 1.47
SNX1-206ENST00000559389 CLIC6Q96NY7 704 aa24.26■■□□□ 1.47
SNX1-206ENST00000559389 TUBE1Q9UJT0 475 aa24.26■■□□□ 1.47
SNX1-206ENST00000559389 NOD1Q9Y239 953 aa24.26■■□□□ 1.47
SNX1-206ENST00000559389 KDM3AQ9Y4C1 1321 aa24.26■■□□□ 1.47
SNX1-206ENST00000559389 TREHO43280 583 aa24.25■■□□□ 1.47
SNX1-206ENST00000559389 EVI5O60447 810 aa24.25■■□□□ 1.47
SNX1-206ENST00000559389 ECM1Q16610 540 aa24.25■■□□□ 1.47
SNX1-206ENST00000559389 HYIQ5T013 277 aa24.25■■□□□ 1.47
SNX1-206ENST00000559389 SERINC5Q86VE9 423 aa24.25■■□□□ 1.47
SNX1-206ENST00000559389 LEO1Q8WVC0 666 aaPredicted RBP24.25■■□□□ 1.47
SNX1-206ENST00000559389 LTBP2Q14767 1821 aa24.25■■□□□ 1.47
SNX1-206ENST00000559389 TANC1Q9C0D5 1861 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 DDX11L8A8MPP1 907 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 SLC26A4O43511 780 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 C22orf31O95567 290 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 PTK7Q13308 1070 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 CABP7Q86V35 215 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 DHX38Q92620 1227 aaKnown RBP24.24■■□□□ 1.47
SNX1-206ENST00000559389 DPF3Q92784 378 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 SPATA32Q96LK8 384 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 CEP89Q96ST8 783 aa24.24■■□□□ 1.47
SNX1-206ENST00000559389 TCHHQ07283 1943 aa24.23■■□□□ 1.47
SNX1-206ENST00000559389 LOXHD1Q8IVV2 1947 aa24.23■■□□□ 1.47
SNX1-206ENST00000559389 CUTAO60888 179 aa24.23■■□□□ 1.47
SNX1-206ENST00000559389 CYP2C9P11712 490 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms