RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ATP13A4Q4VNC1 1196 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 CATSPEREQ5SY80 951 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 LHFPL2Q6ZUX7 228 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 C11orf74Q86VG3 221 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 ZC3H18Q86VM9 953 aaKnown RBP4.65□□□□□ -1.67
SRP54-209ENST00000555746 PROSER1Q86XN7 944 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 PASD1Q8IV76 773 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 ZZZ3Q8IYH5 903 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 C16orf92Q96LL3 132 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 ELF4Q99607 663 aaPredicted RBP4.65□□□□□ -1.67
SRP54-209ENST00000555746 PCIF1Q9H4Z3 704 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 PCDH18Q9HCL0 1135 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 ASB1Q9Y576 335 aa4.65□□□□□ -1.67
SRP54-209ENST00000555746 WDR97A6NE52 1622 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 KIF21BO75037 1637 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 PRDM2Q13029 1718 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.64□□□□□ -1.67
SRP54-209ENST00000555746 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.64□□□□□ -1.67
SRP54-209ENST00000555746 PRAMEF25A6NGN4 478 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 RASSF10A6NK89 507 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 K7ESF4 209 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 FOXP2O15409 715 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 C8BP07358 591 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 PFKLP17858 780 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 AOAHP28039 575 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 HSPA1LP34931 641 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 NKX3-2P78367 333 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 MESP2Q0VG99 397 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 DBPQ10586 325 aaPredicted RBP4.64□□□□□ -1.67
SRP54-209ENST00000555746 FAPQ12884 760 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 LRRC32Q14392 662 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 EPHA7Q15375 998 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 TERF2Q15554 542 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 CD276Q5ZPR3 534 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 B3GNT8Q7Z7M8 397 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 KRTAP1-3Q8IUG1 177 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 IGDCC3Q8IVU1 814 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 ZNF610Q8N9Z0 462 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 MZB1Q8WU39 189 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 SLC5A5Q92911 643 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 YIPF4Q9BSR8 244 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 PUS7LQ9H0K6 701 aaKnown RBP4.64□□□□□ -1.67
SRP54-209ENST00000555746 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 HOMER2Q9NSB8 354 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 BTBD7Q9P203 1132 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 WASF3Q9UPY6 502 aa4.64□□□□□ -1.67
SRP54-209ENST00000555746 TDRD9Q8NDG6 1382 aaKnown RBP4.64□□□□□ -1.67
SRP54-209ENST00000555746 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 GOLGA6L22H0YM25 854 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 MED14OSP0DP75 135 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 CYP2C8P10632 490 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 ATF2P15336 505 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 LSP1P33241 339 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 STAT5AP42229 794 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 SESN3P58005 492 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 TMPRSS15P98073 1019 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 TMEM132BQ14DG7 1078 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 TMEM132EQ6IEE7 984 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 ESRP1Q6NXG1 681 aaKnown RBP4.63□□□□□ -1.67
SRP54-209ENST00000555746 RTN4RL1Q86UN2 441 aaPredicted RBP4.63□□□□□ -1.67
SRP54-209ENST00000555746 NME9Q86XW9 330 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 FAM26EQ8N5C1 309 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 STAG1Q8WVM7 1258 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 ASB15Q8WXK1 588 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 FOXRED1Q96CU9 486 aaPredicted RBP4.63□□□□□ -1.67
SRP54-209ENST00000555746 GBP4Q96PP9 640 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 KCNK12Q9HB15 430 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 SLC5A4Q9NY91 659 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 DDX56Q9NY93 547 aaKnown RBP4.63□□□□□ -1.67
SRP54-209ENST00000555746 ADCY10Q96PN6 1610 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 WASHC2CQ9Y4E1 1318 aa4.63□□□□□ -1.67
SRP54-209ENST00000555746 ZNF839A8K0R7 811 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 PPM1GO15355 546 aaPredicted RBP4.62□□□□□ -1.67
SRP54-209ENST00000555746 MPIG6BO95866 241 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 MMEP08473 750 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 ENO2P09104 434 aaPredicted RBP4.62□□□□□ -1.67
SRP54-209ENST00000555746 GLDCP23378 1020 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 CD40P25942 277 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 PTX3P26022 381 aaPredicted RBP4.62□□□□□ -1.67
SRP54-209ENST00000555746 THBS2P35442 1172 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 MC3RP41968 323 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 GUCY2FP51841 1108 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 EPHB3P54753 998 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 EVA1CP58658 441 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 DLG4P78352 724 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 ADCY1Q08828 1119 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 DDB1Q16531 1140 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 BROXQ5VW32 411 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 CD300LDQ6UXZ3 194 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 RASSF3Q86WH2 238 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 DTX3Q8N9I9 347 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 CLRN3Q8NCR9 226 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 SMARCC2Q8TAQ2 1214 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 DDX11Q96FC9 970 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 SGPP1Q9BX95 441 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 DLL4Q9NR61 685 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 TOMM22Q9NS69 142 aa4.62□□□□□ -1.67
SRP54-209ENST00000555746 USP36Q9P275 1121 aaKnown RBP4.62□□□□□ -1.67
SRP54-209ENST00000555746 TEX14Q8IWB6 1497 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms