RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 IL18BPO95998 194 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 KNG1P01042 644 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 AOAHP28039 575 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 MASP1P48740 699 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 KIAA2012Q0VF49 1180 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 SMAD2Q15796 467 aaKnown RBP4.41□□□□□ -1.7
SCFD1-213ENST00000554776 SEPT7Q16181 437 aaKnown RBP4.41□□□□□ -1.7
SCFD1-213ENST00000554776 CFAP100Q494V2 611 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 PHF19Q5T6S3 580 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 CPZQ66K79 652 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 CREB3L3Q68CJ9 461 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 CNNM4Q6P4Q7 775 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 PKN3Q6P5Z2 889 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 TRMT10BQ6PF06 316 aaKnown RBP4.41□□□□□ -1.7
SCFD1-213ENST00000554776 UBE2R2Q712K3 238 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-213ENST00000554776 THNSL2Q86YJ6 484 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 ANKRD13AQ8IZ07 590 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 PPM1KQ8N3J5 372 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 C2orf69Q8N8R5 385 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 CXorf38Q8TB03 319 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 DLG3Q92796 817 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 WNK4Q96J92 1243 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 BOCQ9BWV1 1114 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 SPC25Q9HBM1 224 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 SLC39A2Q9NP94 309 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 BTBD7Q9P203 1132 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 ARHGAP20Q9P2F6 1191 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 B4GALT6Q9UBX8 382 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 ZFP69BQ9UJL9 534 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 COL4A3BPQ9Y5P4 624 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 DUSP10Q9Y6W6 482 aa4.41□□□□□ -1.7
SCFD1-213ENST00000554776 hCG_2014768A0A024R1R8 64 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 SCDO00767 359 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 PRICKLE3O43900 615 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-213ENST00000554776 KLHL18O94889 574 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 FBXO21O94952 628 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 HMGB1P09429 215 aaKnown RBP4.4□□□□□ -1.71
SCFD1-213ENST00000554776 MYCLP1P12525 358 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-213ENST00000554776 GLRBP48167 497 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 IRF9Q00978 393 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 PCBP1Q15365 356 aaKnown RBP eCLIP4.4□□□□□ -1.71
SCFD1-213ENST00000554776 ARHGAP44Q17R89 818 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 TAF7LQ5H9L4 462 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 RNF180Q86T96 592 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 KIF18BQ86Y91 864 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 STPG3Q8N7X2 389 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 UBR7Q8N806 425 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 RELTQ969Z4 430 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 MBD6Q96DN6 1003 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 LCORQ96JN0 433 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-213ENST00000554776 FAM126AQ9BYI3 521 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-213ENST00000554776 TMEM168Q9H0V1 697 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 CABP5Q9NP86 173 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 PCDH12Q9NPG4 1184 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 KCNH7Q9NS40 1196 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 ARHGAP28Q9P2N2 729 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 FTSJ1Q9UET6 329 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 MAPRE3Q9UPY8 281 aa4.4□□□□□ -1.71
SCFD1-213ENST00000554776 PTPDC1A2A3K4 754 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 PRAMEF25A6NGN4 478 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 RASSF10A6NK89 507 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 ZNF891A8MT65 544 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-213ENST00000554776 DVL2O14641 736 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 MPIG6BO95866 241 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 F2P00734 622 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 CYP1A1P04798 512 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-213ENST00000554776 PTGS1P23219 599 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 SDHAP31040 664 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 STAT3P40763 770 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 NEK4P51957 841 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 IGBP1P78318 339 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 AMPD3Q01432 767 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 DSG1Q02413 1049 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 SKOR2Q2VWA4 1001 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-213ENST00000554776 BORAQ6PGQ7 559 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 FAM124AQ86V42 546 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 AHI1Q8N157 1196 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 KLHL36Q8N4N3 616 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 NUDT10Q8NFP7 164 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 NUDT11Q96G61 164 aa4.39□□□□□ -1.71
SCFD1-213ENST00000554776 TACO1Q9BSH4 297 aaKnown RBP4.39□□□□□ -1.71
SCFD1-213ENST00000554776 FOXD2O60548 495 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-213ENST00000554776 HIP1RO75146 1068 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 MMEP08473 750 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 VIL1P09327 827 aaKnown RBP4.38□□□□□ -1.71
SCFD1-213ENST00000554776 ATP2A2P16615 1042 aaKnown RBP4.38□□□□□ -1.71
SCFD1-213ENST00000554776 IBSPP21815 317 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-213ENST00000554776 MC4RP32245 332 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 CNR2P34972 360 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 NFATC3Q12968 1075 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 CATSPEREQ5SY80 951 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 UBXN11Q5T124 520 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 FERMT3Q86UX7 667 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 LGI4Q8N135 537 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 ASB15Q8WXK1 588 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 INCENPQ9NQS7 918 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 GALNT8Q9NY28 637 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 ADAM29Q9UKF5 820 aa4.38□□□□□ -1.71
SCFD1-213ENST00000554776 PRKAB1Q9Y478 270 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms