RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TSEN2Q8NCE0 465 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 ABCB11O95342 1321 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 GOLGA8IPA6NC78 632 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 GOLGA8JA6NMD2 632 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 EXOC3O60645 756 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 PDCLQ13371 301 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 ZNF211Q13398 564 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 KNOP1Q1ED39 458 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 HNRNPLLQ8WVV9 542 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 ARL8AQ96BM9 186 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 HOOK2Q96ED9 719 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 GLIS2Q9BZE0 524 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 CEP72Q9P209 647 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 STIM2Q9P246 746 aa14.97□□□□□ -0.01
PRPF40B-209ENST00000548825 AFPP02771 609 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 MYCLP12524 364 aaPredicted RBP14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 UCHL3P15374 230 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 MCM3P25205 808 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 GIT2Q14161 759 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 RRP1BQ14684 758 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 FAM178BQ8IXR5 827 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 NLGN1Q8N2Q7 840 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 ATP2C2O75185 946 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 SYF2O95926 243 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 ADRA2BP18089 450 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 GNGT1P63211 74 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 CFAP58Q5T655 872 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 ZNF571Q7Z3V5 609 aaPredicted RBP14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 PEX26Q7Z412 305 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 CCDC127Q96BQ5 260 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 CTDP1Q9Y5B0 961 aaPredicted RBP14.96□□□□□ -0.01
PRPF40B-209ENST00000548825 GCFC2P16383 781 aaKnown RBP14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 PDE6BP35913 854 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 HGSNATQ68CP4 663 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 SLFN12Q8IYM2 578 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 CERKQ8TCT0 537 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 TMEM39BQ9GZU3 492 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 ZNF277Q9NRM2 450 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 ARAP2Q8WZ64 1704 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 ANO9A1A5B4 782 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 STAT2P52630 851 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 PSMD2Q13200 908 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 FAM186BQ8IYM0 893 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 UBLCP1Q8WVY7 318 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 MASTLQ96GX5 879 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 AJAP1Q9UKB5 411 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 FAM184BQ9ULE4 1060 aa14.95□□□□□ -0.02
PRPF40B-209ENST00000548825 SNHG28P0DPA3 235 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 ALAS1P13196 640 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 TRIM59Q8IWR1 403 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 OGFOD1Q8N543 542 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 BCAS4Q8TDM0 211 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 ZNF577Q9BSK1 485 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 OSGEPQ9NPF4 335 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 PPP1R12BO60237 982 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 SLC18A3Q16572 532 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 WDR93Q6P2C0 686 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 LARGE2Q8N3Y3 721 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 GOLGA5Q8TBA6 731 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 CELF4Q9BZC1 486 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 RRP15Q9Y3B9 282 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 TNRC6CQ9HCJ0 1690 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 A0A1W2PQJ5 194 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 TLDC2A0PJX2 215 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 CALUO43852 315 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 KRT13P13646 458 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 CEP85LQ5SZL2 805 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 VPS36Q86VN1 386 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 SIAH1Q8IUQ4 282 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 PURBQ96QR8 312 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 AMACRQ9UHK6 382 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 FZD1Q9UP38 647 aa14.94□□□□□ -0.02
PRPF40B-209ENST00000548825 CCDC88AQ3V6T2 1871 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 ARHGEF35A5YM69 484 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 hCG_1984214I3L0E3 225 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 MYO1CO00159 1063 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 SPATA31C1P0DKV0 1188 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 ARP10275 920 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 SLC12A3P55017 1021 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 PRKG1Q13976 671 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 KIAA1755Q5JYT7 1200 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 NSMFQ6X4W1 530 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 GBP6Q6ZN66 633 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 ZNF713Q8N859 430 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 MED4Q9NPJ6 270 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 KRIT1O00522 736 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 ITGA4P13612 1032 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 PODNQ7Z5L7 613 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 AGBL1Q96MI9 1066 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 CCDC113Q9H0I3 377 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 USP20Q9Y2K6 914 aa14.93□□□□□ -0.02
PRPF40B-209ENST00000548825 K7ENM7 598 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 RAD51CO43502 376 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 EIF2AK2P19525 551 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms