RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 RBBP6Q7Z6E9 1792 aaKnown RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 A0A1B0GUA9 196 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 TSPY2A6NKD2 308 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 CCDC85CA6NKD9 419 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 BUB1O43683 1085 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 CDC25BP30305 580 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 RFC4P35249 363 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 IL15P40933 162 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 SLC19A1P41440 591 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 ACTN3Q08043 901 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 C3orf58Q8NDZ4 430 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 PKD2L1Q9P0L9 805 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 FHOD1Q9Y613 1164 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 MYH2Q9UKX2 1941 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 KIF28PB7ZC32 967 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 FOXN1O15353 648 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CUTAO60888 179 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 TRPA1O75762 1119 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 FGAP02671 866 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CLTAP09496 248 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 TCIRG1Q13488 830 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 NCAPHQ15003 741 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 SF3B3Q15393 1217 aaKnown RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CCDC93Q567U6 631 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 PEAR1Q5VY43 1037 aaPredicted RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 ZNF746Q6NUN9 644 aaPredicted RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 PIK3AP1Q6ZUJ8 805 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CSGALNACT2Q8N6G5 542 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 FAM71BQ8TC56 605 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 NOC4LQ9BVI4 516 aaKnown RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 INTS13Q9NVM9 706 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 EPN1Q9Y6I3 576 aaPredicted RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 GREB1LQ9C091 1923 aaPredicted RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 SASH3O75995 380 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 TUBBP07437 444 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CCDC172P0C7W6 258 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 KRT13P13646 458 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 GCKP35557 465 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 PDCLQ13371 301 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 PPP1R7Q15435 360 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 IFIT1BQ5T764 474 aaKnown RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 FBXW10Q5XX13 1052 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 ADAT2Q7Z6V5 191 aaKnown RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 RPAINQ86UA6 219 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 MAGEB6Q8N7X4 407 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 GLIS3Q8NEA6 775 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 MED15Q96RN5 788 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 SPON2Q9BUD6 331 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 KANSL2Q9H9L4 492 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 EFCC1Q9HA90 598 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 KCNK9Q9NPC2 374 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 SEC31BQ9NQW1 1179 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 HDAC6Q9UBN7 1215 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 STK38LQ9Y2H1 464 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 TACC3Q9Y6A5 838 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 MYH6P13533 1939 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 TMEM110-MUSTN1A8MSY1 372 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 H7C1W4 665 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 TADA3O75528 432 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CSF1RP07333 972 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 ACPPP15309 386 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CYP7A1P22680 504 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 CDC27P30260 824 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 MAGEA1P43355 309 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 MAGEA9P43362 315 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 KIAA0753Q2KHM9 967 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 ARSJQ5FYB0 599 aaPredicted RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 HEATR3Q7Z4Q2 680 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 SRLQ86TD4 932 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 C2CD5Q86YS7 1000 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 SMARCC2Q8TAQ2 1214 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 SECISBP2LQ93073 1101 aaKnown RBP6.04□□□□□ -1.44
LIMA1-203ENST00000547825 RTEL1Q9NZ71 1219 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 LCMT1Q9UIC8 334 aa6.04□□□□□ -1.44
LIMA1-203ENST00000547825 PHLPP2Q6ZVD8 1323 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 TNFRSF10AO00220 468 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 TEX33O43247 280 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 MBD4O95243 580 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 RHOQP17081 205 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 BMP6P22004 513 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 SARNPP82979 210 aaKnown RBP6.03□□□□□ -1.44
LIMA1-203ENST00000547825 PPFIA1Q13136 1202 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 GCKRQ14397 625 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 VSTM4Q8IW00 320 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 ANKRD13AQ8IZ07 590 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 OR8K1Q8NGG5 319 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 MGARPQ8TDB4 240 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 NELFBQ8WX92 580 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 ARMC5Q96C12 935 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 CRAMP1Q96RY5 1269 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 ZCCHC2Q9C0B9 1178 aaKnown RBP6.03□□□□□ -1.44
LIMA1-203ENST00000547825 ARMT1Q9H993 441 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 SENP2Q9HC62 589 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 ANKRD18BA2A2Z9 1011 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 VSNL1P62760 191 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 C2orf54Q08AI8 447 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 PAK1Q13153 545 aa6.03□□□□□ -1.44
LIMA1-203ENST00000547825 RAPGEF1Q13905 1077 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms