RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CC2D2BQ6DHV5 1058 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 SLFN12Q8IYM2 578 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 MBOAT7Q96N66 472 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 LRRC27Q9C0I9 530 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 DMGDHQ9UI17 866 aaKnown RBP16.23■□□□□ 0.19
DDX55-209ENST00000542286 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
DDX55-209ENST00000542286 RPA1P27694 616 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 STAT2P52630 851 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 SFMBT2Q5VUG0 894 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 PROCA1Q8NCQ7 364 aaPredicted RBP16.23■□□□□ 0.19
DDX55-209ENST00000542286 GMCL1P1Q8NEA9 526 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 FAM71BQ8TC56 605 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 LRRC1Q9BTT6 524 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 HDAC9Q9UKV0 1011 aa16.23■□□□□ 0.19
DDX55-209ENST00000542286 IGLV3-22A0A075B6J6 115 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 ARP10275 920 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 KLRC1P26715 233 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 AP3B2Q13367 1082 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 HAUS3Q68CZ6 603 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.22■□□□□ 0.199e-7■■■■■ 144.6
DDX55-209ENST00000542286 SNX12Q9UMY4 172 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 SPDYE2BA6NHP3 402 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 USO1O60763 962 aaKnown RBP16.22■□□□□ 0.19
DDX55-209ENST00000542286 SPDYE6P0CI01 402 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 SYT2Q8N9I0 419 aaPredicted RBP16.22■□□□□ 0.19
DDX55-209ENST00000542286 BANK1Q8NDB2 785 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 FAM204AQ9H8W3 233 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 HOMER2Q9NSB8 354 aa16.22■□□□□ 0.19
DDX55-209ENST00000542286 TACC1O75410 805 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 CDK17Q00537 523 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 Q4G0T1 1027 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 GPATCH11Q8N954 259 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 AGBL1Q96MI9 1066 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 OSBPL9Q96SU4 736 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
DDX55-209ENST00000542286 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 ABCB11O95342 1321 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 COL4A5P29400 1685 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 ZSCAN5CA6NGD5 496 aaPredicted RBP16.21■□□□□ 0.19
DDX55-209ENST00000542286 CETN3O15182 167 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 SKIDA1Q1XH10 827 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 RDH13Q8NBN7 331 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 TLR10Q9BXR5 811 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 ZBTB21Q9ULJ3 1066 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 ASTN1O14525 1302 aa16.21■□□□□ 0.19
DDX55-209ENST00000542286 FRMD3A2A2Y4 597 aa16.21■□□□□ 0.18
DDX55-209ENST00000542286 TMEM150BA6NC51 233 aa16.21■□□□□ 0.18
DDX55-209ENST00000542286 SLITRK3O94933 977 aa16.21■□□□□ 0.18
DDX55-209ENST00000542286 KNOP1Q1ED39 458 aaKnown RBP16.21■□□□□ 0.18
DDX55-209ENST00000542286 NBPF9Q3BBW0 867 aa16.21■□□□□ 0.18
DDX55-209ENST00000542286 LRCH2Q5VUJ6 765 aa16.21■□□□□ 0.18
DDX55-209ENST00000542286 RINT1Q6NUQ1 792 aa16.21■□□□□ 0.18
DDX55-209ENST00000542286 CEP72Q9P209 647 aa16.21■□□□□ 0.18
DDX55-209ENST00000542286 TISP43B9A030 160 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 PPFIA4O75335 1185 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 PALMO75781 387 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 EGFRP00533 1210 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 HDLBPQ00341 1268 aaKnown RBP16.2■□□□□ 0.18
DDX55-209ENST00000542286 KLHL30Q0D2K2 578 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 SLC9C1Q4G0N8 1177 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 KLHDC7AQ5VTJ3 777 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 EFCAB13Q8IY85 973 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 MYCT1Q8N699 235 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 EHBP1Q8NDI1 1231 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 ERMNQ8TAM6 284 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 RBM46Q8TBY0 533 aaKnown RBP16.2■□□□□ 0.18
DDX55-209ENST00000542286 CNKSR1Q969H4 720 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 GANQ9H2C0 597 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 LRRN2O75325 713 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 PTK2Q05397 1052 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 TUBB2AQ13885 445 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 DLGAP5Q15398 846 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 CPXCR1Q8N123 301 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 TRIM58Q8NG06 486 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 TUBB2BQ9BVA1 445 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 ARMCX3Q9UH62 379 aaPredicted RBP16.2■□□□□ 0.18
DDX55-209ENST00000542286 FZD1Q9UP38 647 aa16.2■□□□□ 0.18
DDX55-209ENST00000542286 CNTNAP1P78357 1384 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 ESYT3A0FGR9 886 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 TBCAO75347 108 aaKnown RBP16.19■□□□□ 0.18
DDX55-209ENST00000542286 OTOP1Q7RTM1 612 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 IL31RAQ8NI17 732 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 ZNF646O15015 1829 aaPredicted RBP16.19■□□□□ 0.18
DDX55-209ENST00000542286 ENTPD3O75355 529 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 NR3C1P04150 777 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 TUBB4BP68371 445 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 DNAJC21Q5F1R6 531 aaKnown RBP16.19■□□□□ 0.18
DDX55-209ENST00000542286 ZNF571Q7Z3V5 609 aaPredicted RBP16.19■□□□□ 0.18
DDX55-209ENST00000542286 SPATA4Q8NEY3 305 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 CEP63Q96MT8 703 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 MRIQ9BWK5 157 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 GBP3Q9H0R5 595 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 MED4Q9NPJ6 270 aa16.19■□□□□ 0.18
DDX55-209ENST00000542286 RBM12Q9NTZ6 932 aaKnown RBP16.19■□□□□ 0.18
DDX55-209ENST00000542286 TGFB1I1O43294 461 aa16.18■□□□□ 0.18
DDX55-209ENST00000542286 LCA5LO95447 670 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms