RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 PPP2R2AP63151 447 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 MAP4K2Q12851 820 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 TUSC3Q13454 348 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 PAN2Q504Q3 1202 aaKnown RBP4.32□□□□□ -1.72
COPB1-205ENST00000526527 OTOP3Q7RTS5 596 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 MRGPRGQ86SM5 289 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 DHX37Q8IY37 1157 aaKnown RBP4.32□□□□□ -1.72
COPB1-205ENST00000526527 SYNPOQ8N3V7 929 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 GIMAP8Q8ND71 665 aaPredicted RBP4.32□□□□□ -1.72
COPB1-205ENST00000526527 IER2Q9BTL4 223 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 PHF20Q9BVI0 1012 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 KCND1Q9NSA2 647 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 ARHGAP20Q9P2F6 1191 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 PTPN22Q9Y2R2 807 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 TELO2Q9Y4R8 837 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 A0A1W2PQU0 124 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 DLX3O60479 287 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 IGSF3O75054 1194 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 IL18BPO95998 194 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 C1SP09871 688 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 ZNF888P0CJ79 500 aaPredicted RBP4.31□□□□□ -1.72
COPB1-205ENST00000526527 SUMO1P63165 101 aaKnown RBP4.31□□□□□ -1.72
COPB1-205ENST00000526527 PFKPQ01813 784 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 C2orf27AQ580R0 203 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 CD276Q5ZPR3 534 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 Q6ZSN1 163 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 USP53Q70EK8 1073 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 TAX1BP1Q86VP1 789 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 C1orf210Q8IVY1 113 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 LARP4BQ92615 738 aaKnown RBP4.31□□□□□ -1.72
COPB1-205ENST00000526527 KATNBL1Q9H079 304 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 PFDN2Q9UHV9 154 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 DMRT1Q9Y5R6 373 aa4.31□□□□□ -1.72
COPB1-205ENST00000526527 H0Y858 1186 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 ENO2P09104 434 aaPredicted RBP4.3□□□□□ -1.72
COPB1-205ENST00000526527 FGFR1P11362 822 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 COMTP21964 271 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 CANXP27824 592 aaKnown RBP4.3□□□□□ -1.72
COPB1-205ENST00000526527 KRTAP10-9P60411 292 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 FNDC7Q5VTL7 733 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 PCSK4Q6UW60 755 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 HOMER1Q86YM7 354 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 REXO1L1PQ8IX06 675 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 IFNL2Q8IZJ0 200 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 UHMK1Q8TAS1 419 aaKnown RBP4.3□□□□□ -1.72
COPB1-205ENST00000526527 NEIL1Q96FI4 390 aaPredicted RBP4.3□□□□□ -1.72
COPB1-205ENST00000526527 PLEKHG4BQ96PX9 1271 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 PSMD1Q99460 953 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 DNAJC7Q99615 494 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 KCNJ15Q99712 375 aa4.3□□□□□ -1.72
COPB1-205ENST00000526527 TACO1Q9BSH4 297 aaKnown RBP4.3□□□□□ -1.72
COPB1-205ENST00000526527 PDGFDQ9GZP0 370 aaPredicted RBP4.3□□□□□ -1.72
COPB1-205ENST00000526527 SLKQ9H2G2 1235 aaPredicted RBP4.3□□□□□ -1.72
COPB1-205ENST00000526527 ZNF839A8K0R7 811 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 NKRFO15226 690 aaKnown RBP eCLIP4.29□□□□□ -1.72
COPB1-205ENST00000526527 GNAT1P11488 350 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 PTMSP20962 102 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 GRK2P25098 689 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 GRK3P35626 688 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 USP10Q14694 798 aaKnown RBP4.29□□□□□ -1.72
COPB1-205ENST00000526527 KCNT2Q6UVM3 1135 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 RSPO2Q6UXX9 243 aaPredicted RBP4.29□□□□□ -1.72
COPB1-205ENST00000526527 FUKQ8N0W3 1084 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 ZBTB38Q8NAP3 1195 aaPredicted RBP4.29□□□□□ -1.72
COPB1-205ENST00000526527 CACTINQ8WUQ7 758 aaKnown RBP4.29□□□□□ -1.72
COPB1-205ENST00000526527 APPBP2Q92624 585 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 TMX1Q9H3N1 280 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 MMRN2Q9H8L6 949 aa4.29□□□□□ -1.72
COPB1-205ENST00000526527 ARID4BQ4LE39 1312 aaPredicted RBP4.28□□□□□ -1.72
COPB1-205ENST00000526527 TRBV23-1A0A0A0MS06 115 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 FAM221BA6H8Z2 402 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 ACOT7O00154 380 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 CDC45O75419 566 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 ADH4P08319 380 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 ACO1P21399 889 aaKnown RBP4.28□□□□□ -1.72
COPB1-205ENST00000526527 SPIRE1Q08AE8 756 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 CCDC142Q17RM4 750 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 HABP4Q5JVS0 413 aaKnown RBP4.28□□□□□ -1.72
COPB1-205ENST00000526527 NSMFQ6X4W1 530 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 LBX2Q6XYB7 198 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 SPATC1Q76KD6 591 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 MAMDC2Q7Z304 686 aaPredicted RBP4.28□□□□□ -1.72
COPB1-205ENST00000526527 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.28□□□□□ -1.72
COPB1-205ENST00000526527 IL17DQ8TAD2 202 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 SH3TC2Q8TF17 1288 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 SLC39A2Q9NP94 309 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 DSEQ9UL01 958 aa4.28□□□□□ -1.72
COPB1-205ENST00000526527 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
COPB1-205ENST00000526527 AQP7O14520 342 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 PRODHO43272 600 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 EFCAB14O75071 495 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 PABPC1P11940 636 aaKnown RBP4.27□□□□□ -1.73
COPB1-205ENST00000526527 MAKP20794 623 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 EPHA5P54756 1037 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 RAC3P60763 192 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 TUBA3CQ13748 450 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.73
COPB1-205ENST00000526527 TCEA2Q15560 299 aa4.27□□□□□ -1.73
COPB1-205ENST00000526527 NTRK3Q16288 839 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms