RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FAM84BQ96KN1 310 aaPredicted RBP17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 BUB1BO60566 1050 aaPredicted RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 GPC4O75487 556 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 GOLGA8FQ08AF8 430 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 GOLGA8DPQ0D2H9 430 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 SGO2Q562F6 1265 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 P4HBP07237 508 aaKnown RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 KPNA2P52292 529 aaKnown RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 DPCR1Q3MIW9 517 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 ZNF568Q3ZCX4 644 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 ERICH1Q86X53 443 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 SLC44A5Q8NCS7 719 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 RABEP2Q9H5N1 569 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 SCINQ9Y6U3 715 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 TULP4Q9NRJ4 1543 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 CPP00450 1065 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 CHRNA5P30532 468 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 RECQLP46063 649 aaPredicted RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 GRM4Q14833 912 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L6PQ6QN14 398 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 FAM133AQ8N9E0 248 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 RAET1EQ8TD07 263 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 PAGE5Q96GU1 130 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 MTIF3Q9H2K0 278 aaKnown RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 UBN1Q9NPG3 1134 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 PPARGP37231 505 aaPredicted RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 QARSP47897 775 aaKnown RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 ASPHQ12797 758 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 RAPH1Q70E73 1250 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 UNC13DQ70J99 1090 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 MICALL2Q8IY33 904 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 NEDD1Q8NHV4 660 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 PIGOQ8TEQ8 1089 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 GANCQ8TET4 914 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 FAM114A2Q9NRY5 505 aa17.53■□□□□ 0.4
PCDHA3-201ENST00000522353 TBC1D10CQ8IV04 446 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 GRAMD1CQ8IYS0 662 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 ATP6V1E2Q96A05 226 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 MTRQ99707 1265 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 NDST4Q9H3R1 872 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 BAG5Q9UL15 447 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 XXYLT1Q8NBI6 393 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 AIFM3Q96NN9 605 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 GCOM2Q9BZD3 368 aaPredicted RBP17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 CNOT7Q9UIV1 285 aaKnown RBP17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 KRT3P12035 628 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 THOC5Q13769 683 aaKnown RBP17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 SEPT6Q14141 434 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 IQCB1Q15051 598 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 SH2D4BQ5SQS7 431 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 RNF219Q5W0B1 726 aaPredicted RBP17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 SIRT2Q8IXJ6 389 aa17.52■□□□□ 0.4
PCDHA3-201ENST00000522353 DPYSL4O14531 572 aa17.52■□□□□ 0.39
PCDHA3-201ENST00000522353 COBLO75128 1261 aa17.52■□□□□ 0.39
PCDHA3-201ENST00000522353 DARS2Q6PI48 645 aaKnown RBP17.52■□□□□ 0.39
PCDHA3-201ENST00000522353 CCDC170Q8IYT3 715 aa17.52■□□□□ 0.39
PCDHA3-201ENST00000522353 ENAHQ8N8S7 591 aaPredicted RBP17.52■□□□□ 0.39
PCDHA3-201ENST00000522353 CDC23Q9UJX2 597 aa17.52■□□□□ 0.39
PCDHA3-201ENST00000522353 DAAM1Q9Y4D1 1078 aa17.52■□□□□ 0.39
PCDHA3-201ENST00000522353 SERPING1P05155 500 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 IRX4P78413 519 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 QRICH1Q2TAL8 776 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 TMEM106CQ9BVX2 250 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 MED4Q9NPJ6 270 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 TAF1CQ15572 869 aaPredicted RBP17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 TBC1D16Q8TBP0 767 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 RNF14Q9UBS8 474 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 FAM8A1Q9UBU6 413 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 USH1CQ9Y6N9 552 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 GOLGA8QA0A0J9YX86 632 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 GOLGA8OA6NCC3 632 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 GOLGA8NF8WBI6 632 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 PGRMC1O00264 195 aaKnown RBP17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 TTC39CQ8N584 583 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 GDAP1Q8TB36 358 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 SPATA33Q96N06 139 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 ECEL1O95672 775 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 GNGT1P63211 74 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 SPATS2Q86XZ4 545 aaKnown RBP17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 PPP1R12CQ9BZL4 782 aa17.51■□□□□ 0.39
PCDHA3-201ENST00000522353 HMGB1P1B2RPK0 211 aaPredicted RBP17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 PSMC5P62195 406 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 RESTQ13127 1097 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 MYLK4Q86YV6 388 aaPredicted RBP17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 SPZ1Q9BXG8 430 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 C1orf167Q5SNV9 1468 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 PTPN22Q9Y2R2 807 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 NEDD4P46934 1319 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 HMGCS2P54868 508 aa17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.5■□□□□ 0.39
PCDHA3-201ENST00000522353 TMEM35BQ8NCS4 154 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms