RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 BARX1Q9HBU1 254 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 INCENPQ9NQS7 918 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 SAMD15Q9P1V8 674 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 B3GALT1Q9Y5Z6 326 aa5.13□□□□□ -1.59
HMGB1P29-201ENST00000505659 SLC12A8A0AV02 714 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 LAMTOR5O43504 91 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 OPA1O60313 960 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 CHGBP05060 677 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 ZBTB48P10074 688 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 MECP2P51608 486 aaKnown RBP5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 IRF9Q00978 393 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 TMEM132BQ14DG7 1078 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 TKFCQ3LXA3 575 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 FNDC3BQ53EP0 1204 aaKnown RBP5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 CATSPEREQ5SY80 951 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 ZCCHC8Q6NZY4 707 aaKnown RBP5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 C2orf69Q8N8R5 385 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 DLG3Q92796 817 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 AJUBAQ96IF1 538 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 KCNH7Q9NS40 1196 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 CD2APQ9Y5K6 639 aa5.12□□□□□ -1.59
HMGB1P29-201ENST00000505659 PRAMEF22A3QJZ6 481 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 DVL2O14641 736 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 FOXP2O15409 715 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 CNOT4O95628 575 aaKnown RBP5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 IGFALSP35858 605 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 RRADP55042 308 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 HERVK_113P62684 666 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 PABPC4Q13310 644 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 WDR72Q3MJ13 1102 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 RALYLQ86SE5 291 aaKnown RBP5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 JAZF1Q86VZ6 243 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 ERCC4Q92889 916 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 LOXL4Q96JB6 756 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 GBP4Q96PP9 640 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 KATNBL1Q9H079 304 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 MEGF9Q9H1U4 602 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 GALNT8Q9NY28 637 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 ST6GALNAC2Q9UJ37 374 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 CDC42EP3Q9UKI2 254 aa5.11□□□□□ -1.59
HMGB1P29-201ENST00000505659 TRAF5O00463 557 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 GPR42O15529 346 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 ASLP04424 464 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 APPP05067 770 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 EPHB4P54760 987 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 PPP2CBP62714 309 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 PPP2CAP67775 309 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 CD83Q01151 205 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 TOP3AQ13472 1001 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 NOLC1Q14978 699 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 PIK3R6Q5UE93 754 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 ARHGEF18Q6ZSZ5 1173 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 OTOP1Q7RTM1 612 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 PLEKHH3Q7Z736 793 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 DDX53Q86TM3 631 aaKnown RBP5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 CHST14Q8NCH0 376 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 HIPK4Q8NE63 616 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 C8orf49Q96NF6 230 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 BOCQ9BWV1 1114 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 KRTAP3-1Q9BYR8 98 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 KIAA1683Q9H0B3 1180 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 JADE2Q9NQC1 790 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 SMPD4Q9NXE4 827 aa5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 MRPL42Q9Y6G3 142 aaKnown RBP5.1□□□□□ -1.59
HMGB1P29-201ENST00000505659 HIP1RO75146 1068 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 NPTXRO95502 500 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 JMJD7P0C870 316 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 POLD1P28340 1107 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 ECE1P42892 770 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 KCNQ1P51787 676 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 USP10Q14694 798 aaKnown RBP5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 ICAM4Q14773 271 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 STILQ15468 1287 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 SPATS1Q496A3 300 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 KANK2Q63ZY3 851 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 GLB1LQ6UWU2 654 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 LARP4Q71RC2 724 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 REXO1L1PQ8IX06 675 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 GNRHR2Q96P88 292 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 FANCLQ9NW38 375 aa5.09□□□□□ -1.59
HMGB1P29-201ENST00000505659 PTPDC1A2A3K4 754 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 FAM83GA6ND36 823 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 ADRB1P08588 477 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 SDHAP31040 664 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 MAGEA10P43363 369 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 KIF11P52732 1056 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 ADAM17P78536 824 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 SURF1Q15526 300 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 TBR1Q16650 682 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 ZNF827Q17R98 1081 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 CDCA2Q69YH5 1023 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 DPP8Q6V1X1 898 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 RTN4RL1Q86UN2 441 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 FOXRED1Q96CU9 486 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 WNK4Q96J92 1243 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 LRRC37BQ96QE4 947 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 BTBD2Q9BX70 525 aa5.08□□□□□ -1.6
HMGB1P29-201ENST00000505659 OR10A5Q9H207 317 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms