RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 PLEKHH3Q7Z736 793 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 RALYLQ86SE5 291 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 AMNQ9BXJ7 453 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 KRTAP4-2Q9BYR5 136 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 KATNBL1Q9H079 304 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 INCENPQ9NQS7 918 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 SMPD4Q9NXE4 827 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 ST6GALNAC2Q9UJ37 374 aa6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 CNOT11Q9UKZ1 510 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-218ENST00000505009 GPR42O15529 346 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 DNAJC8O75937 253 aaPredicted RBP6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 CNOT4O95628 575 aaKnown RBP6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 ADCY8P40145 1251 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 MAGEA10P43363 369 aaPredicted RBP6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 EPHB4P54760 987 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 GLB1LQ6UWU2 654 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 ASB15Q8WXK1 588 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 DLG3Q92796 817 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 MEGF9Q9H1U4 602 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 JADE2Q9NQC1 790 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 KCNH7Q9NS40 1196 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 B3GALT1Q9Y5Z6 326 aa6.98□□□□□ -1.29
UBE2D3-218ENST00000505009 SLC12A8A0AV02 714 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 NPEPPSL1A6NEC2 478 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 GLRX3O76003 335 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 ZBTB48P10074 688 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 HERVK_113P62684 666 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 ADAM17P78536 824 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 TOP3AQ13472 1001 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 ICAM4Q14773 271 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 TMEM132BQ14DG7 1078 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 SURF1Q15526 300 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 WDR72Q3MJ13 1102 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 GGNQ86UU5 652 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 C2orf69Q8N8R5 385 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 TNPO3Q9Y5L0 923 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-218ENST00000505009 M0R2C6 588 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 KRT37O76014 449 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 SDSP20132 328 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 POLD1P28340 1107 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 FNDC3BQ53EP0 1204 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 CATSPEREQ5SY80 951 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 SAMD11Q96NU1 681 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 GBP4Q96PP9 640 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 SAMD15Q9P1V8 674 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 CDC42EP3Q9UKI2 254 aa6.96□□□□□ -1.3
UBE2D3-218ENST00000505009 PRAMEF22A3QJZ6 481 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 FOXP2O15409 715 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 NPTXRO95502 500 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 ASMTLO95671 621 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 MECP2P51608 486 aaKnown RBP6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 RRADP55042 308 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 IRF9Q00978 393 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 NOLC1Q14978 699 aaKnown RBP eCLIP6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 ZCCHC8Q6NZY4 707 aaKnown RBP6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 REXO1L1PQ8IX06 675 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 GNRHR2Q96P88 292 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 TMEM260Q9NX78 707 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 SLC4A7Q9Y6M7 1214 aa6.95□□□□□ -1.3
UBE2D3-218ENST00000505009 DVL2O14641 736 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 OPA1O60313 960 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 IGFALSP35858 605 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 ECE1P42892 770 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 KCNQ1P51787 676 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 CD83Q01151 205 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 STILQ15468 1287 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 KANK2Q63ZY3 851 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 SLFN13Q68D06 897 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 LARP4Q71RC2 724 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 OTOP1Q7RTM1 612 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 HIPK4Q8NE63 616 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 ERCC4Q92889 916 aaPredicted RBP6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 WNK4Q96J92 1243 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 RNPC3Q96LT9 517 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 LRRC37BQ96QE4 947 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 CARD11Q9BXL7 1154 aa6.94□□□□□ -1.3
UBE2D3-218ENST00000505009 INSRRP14616 1297 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 ZNF20P17024 532 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 DDX53Q86TM3 631 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 CIR1Q86X95 450 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 BOCQ9BWV1 1114 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 BTBD2Q9BX70 525 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 ZDHHC5Q9C0B5 715 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 KIAA1683Q9H0B3 1180 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 OR10A5Q9H207 317 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 CD248Q9HCU0 757 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 JAG2Q9Y219 1238 aa6.93□□□□□ -1.3
UBE2D3-218ENST00000505009 B4E1Z4 1266 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 TRAF5O00463 557 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 CUTAO60888 179 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 HIP1RO75146 1068 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 ASLP04424 464 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 SDHAP31040 664 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms