RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 CA12O43570 354 aa10.4□□□□□ -0.75
GAPVD1-219ENST00000495955 AKR1B10O60218 316 aa10.4□□□□□ -0.75
GAPVD1-219ENST00000495955 PLA2G6O60733 806 aa10.4□□□□□ -0.75
GAPVD1-219ENST00000495955 ADCYAP1R1P41586 468 aa10.4□□□□□ -0.75
GAPVD1-219ENST00000495955 SFR1Q86XK3 245 aa10.4□□□□□ -0.75
GAPVD1-219ENST00000495955 FBXO2Q9UK22 296 aaPredicted RBP10.4□□□□□ -0.75
GAPVD1-219ENST00000495955 A0A0U1RQG5 324 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 PHF20L1A8MW92 1017 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 NKRFO15226 690 aaKnown RBP eCLIP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF746Q6NUN9 644 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF784Q8NCA9 323 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 TMEM143Q96AN5 459 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 MMS19Q96T76 1030 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 ARMCX3Q9UH62 379 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 TACC3Q9Y6A5 838 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 COL5A3P25940 1745 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 EYA4O95677 639 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 CASP1P29466 404 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 LBX2Q6XYB7 198 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 AGO4Q9HCK5 861 aaKnown RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 CEP83Q9Y592 693 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 IGKV6D-41A0A0C4DH26 115 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 P4HA1P13674 534 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 ATF7P17544 494 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 NR2F2P24468 414 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 BMS1Q14692 1282 aaKnown RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 CCDC181Q5TID7 509 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF658Q5TYW1 1059 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 SAPCD2Q86UD0 394 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 TLK2Q86UE8 772 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 SHCBP1Q8NEM2 672 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 LBHD1Q9BQE6 289 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 MSTO1Q9BUK6 570 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 BTBD7Q9P203 1132 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 NUB1Q9Y5A7 615 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 C17orf102A2RUQ5 167 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 HIP1RO75146 1068 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF286BP0CG31 522 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 TNNT1P13805 278 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 GSDMDP57764 484 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 RNF149Q8NC42 400 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 PORCNQ9H237 461 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 CBX8Q9HC52 389 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 STARD7Q9NQZ5 370 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 ZDHHC9Q9Y397 364 aa10.39□□□□□ -0.75
GAPVD1-219ENST00000495955 XPOTO43592 962 aaKnown RBP10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 HBP1O60381 514 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 JAG1P78504 1218 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 HTRA3P83110 453 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 PSMD2Q13200 908 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 CYP2W1Q8TAV3 490 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 PRM3Q9NNZ6 103 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 ZNF112Q9UJU3 913 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 MAN1B1Q9UKM7 699 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 IRS2Q9Y4H2 1338 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 NEBLO76041 1014 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 CYP2C9P11712 490 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 SLC8A3P57103 927 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 SHC4Q6S5L8 630 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 METTL7BQ6UX53 244 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 THNSL1Q8IYQ7 743 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 GBP3Q9H0R5 595 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 C2orf40Q9H1Z8 148 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 GOLPH3LQ9H4A5 285 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 RIPK3Q9Y572 518 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 TLR2O60603 784 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 DGAT1O75907 488 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 OATP04181 439 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 ALCAMQ13740 583 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 Q4G0T1 1027 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 MOXD1Q6UVY6 613 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 LRRC71Q8N4P6 559 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 INPP5FQ9Y2H2 1132 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 PLIN4Q96Q06 1357 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 NPHP3-ACAD11A0A0J9YXS1 232 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 ELNP15502 786 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 PTGS1P23219 599 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 UNC13DQ70J99 1090 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 CCDC94Q9BW85 323 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 TAF1P21675 1872 aa10.38□□□□□ -0.75
GAPVD1-219ENST00000495955 GOLGA8IPA6NC78 632 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 GOLGA8JA6NMD2 632 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 MAGEB2O15479 319 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 SNHG28P0DPA3 235 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 TGFB3P10600 412 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 PRKAR2AP13861 404 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 EMC2Q15006 297 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 IER5Q5VY09 327 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 EFCAB12Q6NXP0 572 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 RDM1Q8NG50 284 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 SBF2Q86WG5 1849 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 KCNJ18B7U540 433 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 SUPT20HL2P0C7V6 817 aa10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 TFAMQ00059 246 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-219ENST00000495955 KCNJ12Q14500 433 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms