RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ENTPD7Q9NQZ7 604 aa17.71■□□□□ 0.43
U2AF1-211ENST00000486519 POTEMA6NI47 508 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 STAG3L1P0CL83 205 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 POTEGQ6S5H5 508 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 STOX1Q6ZVD7 989 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 MRPS27Q92552 414 aaKnown RBP17.7■□□□□ 0.42
U2AF1-211ENST00000486519 NECTIN4Q96NY8 510 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 ZKSCAN3Q9BRR0 538 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 VAT1LQ9HCJ6 419 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
U2AF1-211ENST00000486519 NRCAMQ92823 1304 aa17.7■□□□□ 0.42
U2AF1-211ENST00000486519 FSD2A1L4K1 749 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 CLASP2O75122 1294 aaKnown RBP17.69■□□□□ 0.42
U2AF1-211ENST00000486519 HMMRO75330 724 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 EOMESO95936 686 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 DCNP07585 359 aaKnown RBP17.69■□□□□ 0.42
U2AF1-211ENST00000486519 TGFB3P10600 412 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 MARK3P27448 753 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 MRPS9P82933 396 aaKnown RBP17.69■□□□□ 0.42
U2AF1-211ENST00000486519 GHRHRQ02643 423 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 TPRNQ4KMQ1 711 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 SPECC1Q5M775 1068 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 PDE12Q6L8Q7 609 aaKnown RBP17.69■□□□□ 0.42
U2AF1-211ENST00000486519 CES5AQ6NT32 575 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 TAF2Q6P1X5 1199 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 CASP10Q92851 521 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 MAF1Q9H063 256 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 FAM49AQ9H0Q0 323 aaPredicted RBP17.69■□□□□ 0.42
U2AF1-211ENST00000486519 JMJD4Q9H9V9 463 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 TUBE1Q9UJT0 475 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 FBXL21Q9UKT6 434 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 LRFN2Q9ULH4 789 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 DUSP12Q9UNI6 340 aa17.69■□□□□ 0.42
U2AF1-211ENST00000486519 MBLAC1A4D2B0 266 aaPredicted RBP17.68■□□□□ 0.42
U2AF1-211ENST00000486519 ADRB1P08588 477 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 FGFR1P11362 822 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 MTHFRP42898 656 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 ITIH3Q06033 890 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 PPFIA1Q13136 1202 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 GRIK4Q16099 956 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 GPATCH4Q5T3I0 446 aaKnown RBP17.68■□□□□ 0.42
U2AF1-211ENST00000486519 KIAA1841Q6NSI8 718 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 LRRC55Q6ZSA7 311 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 DLGAP2Q9P1A6 1054 aa17.68■□□□□ 0.42
U2AF1-211ENST00000486519 DBR1Q9UK59 544 aaKnown RBP17.68■□□□□ 0.42
U2AF1-211ENST00000486519 CFHP08603 1231 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 CCND2P30279 289 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 SARSP49591 514 aaKnown RBP17.67■□□□□ 0.42
U2AF1-211ENST00000486519 IGBP1P78318 339 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 TDGQ13569 410 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 KIAA0319Q5VV43 1072 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 MAML2Q8IZL2 1156 aaPredicted RBP17.67■□□□□ 0.42
U2AF1-211ENST00000486519 RSAD2Q8WXG1 361 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 CYP26B1Q9NR63 512 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 ZBTB40Q9NUA8 1239 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 ZNF215Q9UL58 517 aaPredicted RBP17.67■□□□□ 0.42
U2AF1-211ENST00000486519 PATJQ8NI35 1801 aa17.67■□□□□ 0.42
U2AF1-211ENST00000486519 C2orf71A6NGG8 1288 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 STK25O00506 426 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 GLULP15104 373 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 HAND2P61296 217 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 PLCB3Q01970 1234 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 PAK2Q13177 524 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 CHAMP1Q96JM3 812 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 FTHL17Q9BXU8 183 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 KCNK12Q9HB15 430 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 CA14Q9ULX7 337 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 LZTS1Q9Y250 596 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 PCDHB7Q9Y5E2 793 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 IGSF9BQ9UPX0 1349 aa17.66■□□□□ 0.42
U2AF1-211ENST00000486519 SPATA31C2B4DYI2 1134 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 LRRN2O75325 713 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 EPCAMP16422 314 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 PDE4AP27815 886 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 RSPH3Q86UC2 560 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 TBC1D10CQ8IV04 446 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 TBC1D17Q9HA65 648 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 USTQ9Y2C2 406 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 TRPV2Q9Y5S1 764 aa17.65■□□□□ 0.42
U2AF1-211ENST00000486519 MIA3Q5JRA6 1907 aa17.64■□□□□ 0.42
U2AF1-211ENST00000486519 COL9A3Q14050 684 aaPredicted RBP17.64■□□□□ 0.41
U2AF1-211ENST00000486519 TMC5Q6UXY8 1006 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 TMC7Q7Z402 723 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 TRAPPC12Q8WVT3 735 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 AUTS2Q8WXX7 1259 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 TTC14Q96N46 770 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 INPP4AQ96PE3 977 aaPredicted RBP17.64■□□□□ 0.41
U2AF1-211ENST00000486519 CDHR5Q9HBB8 845 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 NGRNQ9NPE2 291 aaKnown RBP17.64■□□□□ 0.41
U2AF1-211ENST00000486519 RNF19AQ9NV58 838 aa17.64■□□□□ 0.41
U2AF1-211ENST00000486519 BAZ2BQ9UIF8 2168 aaKnown RBP17.64■□□□□ 0.41
U2AF1-211ENST00000486519 LAMA4Q16363 1823 aa17.63■□□□□ 0.41
U2AF1-211ENST00000486519 DHX16O60231 1041 aaKnown RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 N4BP1O75113 896 aaKnown RBP17.63■□□□□ 0.41
U2AF1-211ENST00000486519 TGM1P22735 817 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms