RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 NFKBIBQ15653 356 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 UTP14CQ5TAP6 766 aaKnown RBP7.77□□□□□ -1.17
UBR4-214ENST00000486515 RESP18Q5W5W9 173 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 SWSAP1Q6NVH7 229 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 TAPT1Q6NXT6 567 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 PDXDC2PQ6P474 469 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 SV2BQ7L1I2 683 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 RNF180Q86T96 592 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 TLK2Q86UE8 772 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 IGSF22Q8N9C0 903 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 PCSK9Q8NBP7 692 aaKnown RBP7.77□□□□□ -1.17
UBR4-214ENST00000486515 PPTC7Q8NI37 304 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 VTI1AQ96AJ9 217 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 DHX58Q96C10 678 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 FAM167AQ96KS9 214 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 FGD4Q96M96 766 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 NACC1Q96RE7 527 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 EIF2AK1Q9BQI3 630 aaKnown RBP7.77□□□□□ -1.17
UBR4-214ENST00000486515 POLR3CQ9BUI4 534 aaPredicted RBP7.77□□□□□ -1.17
UBR4-214ENST00000486515 PANK2Q9BZ23 570 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 CCSER1Q9C0I3 900 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 TTYH1Q9H313 450 aaPredicted RBP7.77□□□□□ -1.17
UBR4-214ENST00000486515 SMARCAD1Q9H4L7 1026 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 MAGEF1Q9HAY2 307 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 ZNF302Q9NR11 478 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 PDGFCQ9NRA1 345 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 FLRT1Q9NZU1 646 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 STK17AQ9UEE5 414 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 LCTP09848 1927 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 ASTN1O14525 1302 aa7.77□□□□□ -1.17
UBR4-214ENST00000486515 ATRXP46100 2492 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 RBM47A0AV96 593 aaKnown RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 ARHGEF35A5YM69 484 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 PPFIA4O75335 1185 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 RGS20O76081 388 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 ZNF202O95125 648 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 LETM1O95202 739 aaPredicted RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 SMC2O95347 1197 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 SGPL1O95470 568 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 TFRCP02786 760 aaKnown RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 MYL3P08590 195 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 SUPT20HL2P0C7V6 817 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 ZNF865P0CJ78 1059 aaPredicted RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 CYBAP13498 195 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 SMPD1P17405 629 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 CHMP4BP1P59074 171 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 ITGB3BPQ13352 177 aaPredicted RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 KARSQ15046 597 aaKnown RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 GNASQ5JWF2 1037 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 SHC4Q6S5L8 630 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 TRMT1LQ7Z2T5 733 aaKnown RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 NECAB2Q7Z6G3 386 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 ARRDC4Q8NCT1 418 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 BANK1Q8NDB2 785 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 GJA10Q969M2 543 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 EMID1Q96A84 441 aaPredicted RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 DYDC2Q96IM9 177 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 PAWRQ96IZ0 340 aaKnown RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 EPSTI1Q96J88 318 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 CHAMP1Q96JM3 812 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 PLIN2Q99541 437 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 JPH2Q9BR39 696 aaPredicted RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 LXNQ9BS40 222 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 C11orf16Q9NQ32 467 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 XPNPEP3Q9NQH7 507 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 LMBRD1Q9NUN5 540 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 ERAP1Q9NZ08 941 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 GABBR1Q9UBS5 961 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 DDX20Q9UHI6 824 aaKnown RBP7.76□□□□□ -1.17
UBR4-214ENST00000486515 VAV3Q9UKW4 847 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 KIAA1024Q9UPX6 916 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 TRPC6Q9Y210 931 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 EPG5Q9HCE0 2579 aa7.76□□□□□ -1.17
UBR4-214ENST00000486515 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.75□□□□□ -1.17
UBR4-214ENST00000486515 PP2D1A8MPX8 630 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 KBTBD13C9JR72 458 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 DHX15O43143 795 aaKnown RBP7.75□□□□□ -1.17
UBR4-214ENST00000486515 TRAK2O60296 914 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 CABYRO75952 493 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 ARIH2O95376 493 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 MYL1P05976 194 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 GNAT1P11488 350 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 XRCC6P12956 609 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBR4-214ENST00000486515 PLCG1P19174 1290 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 CDC25AP30304 524 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 DNM2P50570 870 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 NDUFA8P51970 172 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 SP2Q02086 613 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 CTTNQ14247 550 aaKnown RBP7.75□□□□□ -1.17
UBR4-214ENST00000486515 DHX8Q14562 1220 aaKnown RBP7.75□□□□□ -1.17
UBR4-214ENST00000486515 FSCN1Q16658 493 aaKnown RBP7.75□□□□□ -1.17
UBR4-214ENST00000486515 XKR3Q5GH77 459 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 AXDND1Q5T1B0 1012 aaPredicted RBP7.75□□□□□ -1.17
UBR4-214ENST00000486515 CATSPER3Q86XQ3 398 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 C4orf19Q8IY42 314 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 AFG1LQ8WV93 481 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
UBR4-214ENST00000486515 PPM1EQ8WY54 764 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms