RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 VSNL1P62760 191 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 PSMD2Q13200 908 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
SMPD4-218ENST00000482171 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 CACNA2D3Q8IZS8 1091 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 CCDC26Q8TAB7 109 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 RPAP3Q9H6T3 665 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-218ENST00000482171 SERPINA10Q9UK55 444 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 FHOD1Q9Y613 1164 aa12.3□□□□□ -0.44
SMPD4-218ENST00000482171 MRC1P22897 1456 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 IL1R1P14778 569 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-218ENST00000482171 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
SMPD4-218ENST00000482171 RPAINQ86UA6 219 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 MYMKA6NI61 221 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 SLC37A4O43826 429 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 MOCS3O95396 460 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 FTCDO95954 541 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 CLTAP09496 248 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 TCP1P17987 556 aaKnown RBP12.29□□□□□ -0.44
SMPD4-218ENST00000482171 CCND2P30279 289 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 GCKP35557 465 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 GMPSP49915 693 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-218ENST00000482171 PRELPP51888 382 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 PDCLQ13371 301 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 SLC51AQ86UW1 340 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 EIF2AK1Q9BQI3 630 aaKnown RBP12.29□□□□□ -0.44
SMPD4-218ENST00000482171 C1orf112Q9NSG2 853 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 PHLDB2Q86SQ0 1253 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 ZBTB8OSQ8IWT0 167 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
SMPD4-218ENST00000482171 PVALEFA0A1B0GWK0 134 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 KIF11P52732 1056 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 SLC30A10Q6XR72 485 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 LXNQ9BS40 222 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 NRBP2Q9NSY0 501 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 H2AFXP16104 143 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 PCK1P35558 622 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 GGCXP38435 758 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 USP11P51784 963 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 CALCOCO2Q13137 446 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 CDAN1Q8IWY9 1227 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 ACCSQ96QU6 501 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 AMFRQ9UKV5 643 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 FAM184BQ9ULE4 1060 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 CHD2O14647 1828 aaKnown RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 SRGAP2CP0DJJ0 459 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 BRDTQ58F21 947 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 LRRN4CLQ8ND94 238 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 MRRFQ96E11 262 aaKnown RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 AGBL1Q96MI9 1066 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 VCPKMTQ9H867 229 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 ADD3Q9UEY8 706 aaKnown RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 MTRF1LQ9UGC7 380 aaKnown RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 PNMA2Q9UL42 364 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 SLC16A4O15374 487 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 VPS41P49754 854 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 Q3C1V9 767 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 UBL4BQ8N7F7 174 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 RNF169Q8NCN4 708 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-218ENST00000482171 L2HGDHQ9H9P8 463 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 EPB41L5Q9HCM4 733 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 STK38LQ9Y2H1 464 aa12.28□□□□□ -0.44
SMPD4-218ENST00000482171 CNGA1P29973 690 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 NMT1P30419 496 aaKnown RBP12.27□□□□□ -0.44
SMPD4-218ENST00000482171 ZBTB33Q86T24 672 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 PPP1R12CQ9BZL4 782 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 MYOZ2Q9NPC6 264 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 UBE2TQ9NPD8 197 aaPredicted RBP12.27□□□□□ -0.44
SMPD4-218ENST00000482171 GGA3Q9NZ52 723 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 PDS5AQ29RF7 1337 aaKnown RBP12.27□□□□□ -0.44
SMPD4-218ENST00000482171 SALL1Q9NSC2 1324 aa12.27□□□□□ -0.44
SMPD4-218ENST00000482171 NR3C1P04150 777 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 MXI1P50539 228 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 KCNH2Q12809 1159 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 NNTQ13423 1086 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 LIN9Q5TKA1 542 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 GKAP1Q5VSY0 366 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-218ENST00000482171 FBXL16Q8N461 479 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 RIN2Q8WYP3 895 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-218ENST00000482171 HDAC6Q9UBN7 1215 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 LRRC53A6NM62 1247 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms