RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 GDF3Q9NR23 364 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 FAM207AQ9NSI2 230 aaPredicted RBP12.4□□□□□ -0.42
U2AF1-209ENST00000475639 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 H7C1W4 665 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 KCNK3O14649 394 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 DIAPH2O60879 1101 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 S100BP04271 92 aaPredicted RBP12.4□□□□□ -0.42
U2AF1-209ENST00000475639 CASP2P42575 452 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 BLMHQ13867 455 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 C2CD5Q86YS7 1000 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 CCDC197Q8NCU1 140 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 KLHL29Q96CT2 875 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 TMBIM4Q9HC24 238 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 ANAPC5Q9UJX4 755 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 SLC13A4Q9UKG4 626 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 ZNF148Q9UQR1 794 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 KCNJ18B7U540 433 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 TRPA1O75762 1119 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 GNA14O95837 355 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 INHBAP08476 426 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 H2AFZP0C0S5 128 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 SAT1P21673 171 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 KCNJ12Q14500 433 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 CDC37Q16543 378 aaPredicted RBP12.4□□□□□ -0.43
U2AF1-209ENST00000475639 PIK3AP1Q6ZUJ8 805 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 H2AFVQ71UI9 128 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 NDST4Q9H3R1 872 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 PANK4Q9NVE7 773 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 PLAAQ9Y263 795 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 MAD1L1Q9Y6D9 718 aa12.4□□□□□ -0.43
U2AF1-209ENST00000475639 A6NHS1 94 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 BTBD18B2RXH4 712 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 ABL2P42684 1182 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 ECE1P42892 770 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 MEA1Q16626 185 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 U2AF1L4Q8WU68 220 aaKnown RBP12.39□□□□□ -0.43
U2AF1-209ENST00000475639 PAGE5Q96GU1 130 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 PCDHB6Q9Y5E3 794 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 GCNT3O95395 438 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
U2AF1-209ENST00000475639 BFSP1Q12934 665 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
U2AF1-209ENST00000475639 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 MAP7D3Q8IWC1 876 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
U2AF1-209ENST00000475639 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 EPB41L5Q9HCM4 733 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
U2AF1-209ENST00000475639 UBN2Q6ZU65 1347 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 PHF20L1A8MW92 1017 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 NPR1P16066 1061 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 POLE2P56282 527 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 SLMAPQ14BN4 828 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 CWF19L1Q69YN2 538 aaKnown RBP12.39□□□□□ -0.43
U2AF1-209ENST00000475639 TYW1BQ6NUM6 668 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 RAPGEF5Q92565 580 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
U2AF1-209ENST00000475639 DENND2AQ9ULE3 1009 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
U2AF1-209ENST00000475639 IGKV5-2P06315 115 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 PRLRP16471 622 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 ABCB4P21439 1286 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 PAPOLAP51003 745 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 DEUP1Q05D60 604 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 ITKQ08881 620 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 TRADDQ15628 312 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 SRPRBQ9Y5M8 271 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 LIN7AO14910 233 aaPredicted RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 ZNF263O14978 683 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 XRCC5P13010 732 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 RFX5P48382 616 aaPredicted RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 GUCY2DQ02846 1103 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 TMED1Q13445 227 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 RCN2Q14257 317 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 MAEAQ7L5Y9 396 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 GSDMAQ96QA5 445 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 PICK1Q9NRD5 415 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 CNOT8Q9UFF9 292 aaKnown RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 NWD1Q149M9 1564 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 CPDO75976 1380 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 ATF7P17544 494 aaPredicted RBP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 USP6P35125 1406 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 YWHAGP61981 247 aaKnown RBP eCLIP12.38□□□□□ -0.43
U2AF1-209ENST00000475639 OCA2Q04671 838 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 TBCCQ15814 346 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 CAPN12Q6ZSI9 719 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 NELFCDQ8IXH7 590 aa12.38□□□□□ -0.43
U2AF1-209ENST00000475639 TRIML2Q8N7C3 387 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms