RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CFAP45Q9UL16 551 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 POLR3KQ9Y2Y1 108 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 SPO11Q9Y5K1 396 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CD2APQ9Y5K6 639 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 CAPN7Q9Y6W3 813 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 DIP2CQ9Y2E4 1556 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 PREX2Q70Z35 1606 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 ABCC1P33527 1531 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 KIF7Q2M1P5 1343 aa6.61□□□□□ -1.35
ECHDC1-215ENST00000475319 GOLGA6L7A0A1B0GV03 622 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 A0A1W2PQH9 124 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 MAP2K7O14733 419 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CYP27B1O15528 508 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 SART1O43290 800 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 PLIN1O60240 522 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 GRIN3BO60391 1043 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CNGA1P29973 690 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 HNRNPMP52272 730 aaKnown RBP eCLIP6.6□□□□□ -1.353e-8■■■■■ 29
ECHDC1-215ENST00000475319 NRLP54845 237 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 OXCT1P55809 520 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 NLRP5P59047 1200 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 TUBB4BP68371 445 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 JAG1P78504 1218 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CBX3Q13185 183 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 BRD3Q15059 726 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 MUM1Q2TAK8 710 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 MRM1Q6IN84 353 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 LLGL2Q6P1M3 1020 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC174Q6PII3 467 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 HFE2Q6ZVN8 426 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 SULF2Q8IWU5 870 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 SYCP3Q8IZU3 236 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CCHCR1Q8TD31 782 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 TTC14Q96N46 770 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ANKRD27Q96NW4 1050 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 IER2Q9BTL4 223 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 FUT8Q9BYC5 575 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ZNF304Q9HCX3 659 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 TYW1Q9NV66 732 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 RTEL1Q9NZ71 1219 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 MARK1Q9P0L2 795 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 VPS18Q9P253 973 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 DDX20Q9UHI6 824 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 DNAI1Q9UI46 699 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 HOOK1Q9UJC3 728 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 LUC7L2Q9Y383 392 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 BZW2Q9Y6E2 419 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ZNF644Q9H582 1327 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 LOC102724428A0A0B4J2F2 783 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC151A5D8V7 595 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ZBTB42B2RXF5 422 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CYTH3O43739 400 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 VAMP4O75379 141 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 FGFR1OPO95684 399 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 GNAT1P11488 350 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 TAL1P17542 331 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 S100A5P33763 92 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 PSMC4P43686 418 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 SIK1P57059 783 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 GNAI1P63096 354 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 PTPN11Q06124 597 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 COX10Q12887 443 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 BIRC3Q13489 604 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 UBAP2LQ14157 1087 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 LBRQ14739 615 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ERCC6LQ2NKX8 1250 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 SMUG1Q53HV7 270 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC93Q567U6 631 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ODR4Q5SWX8 454 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC183Q5T5S1 534 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 VPS53Q5VIR6 699 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 DUSP27Q5VZP5 1158 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 TTC6Q86TZ1 520 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 FERMT3Q86UX7 667 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 FAM178BQ8IXR5 827 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 LRRC43Q8N309 656 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 CHCHD4Q8N4Q1 142 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 TEX9Q8N6V9 391 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 TRPC4APQ8TEL6 797 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ZNF653Q96CK0 615 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 EPSTI1Q96J88 318 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 POP1Q99575 1024 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 EIF2AQ9BY44 585 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 GBP3Q9H0R5 595 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 RNF112Q9ULX5 631 aa6.6□□□□□ -1.35
ECHDC1-215ENST00000475319 ITSN2Q9NZM3 1697 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 A2MP01023 1474 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC162PA2VCL2 907 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 BIRC5O15392 142 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 BNIP3LO60238 219 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 SKAP2O75563 359 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 RASSF9O75901 435 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 B3GALT4O96024 378 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 TUBBP07437 444 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 HSPA1AP0DMV8 641 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 HSPA1BP0DMV9 641 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 CD33P20138 364 aa6.59□□□□□ -1.35
ECHDC1-215ENST00000475319 CDC25BP30305 580 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms