RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 HDAC6Q9UBN7 1215 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 CCDC39Q9UFE4 941 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 SEPT9Q9UHD8 586 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 TUBE1Q9UJT0 475 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 VAV3Q9UKW4 847 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 PPME1Q9Y570 386 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 MAFBQ9Y5Q3 323 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-206ENST00000462613 IGSF9BQ9UPX0 1349 aa7.15□□□□□ -1.26
SF3B1-206ENST00000462613 SPTLC2O15270 562 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 MAGEB2O15479 319 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 SLC26A4O43511 780 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 B4GALT4O60513 344 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 PARNO95453 639 aaKnown RBP7.14□□□□□ -1.27
SF3B1-206ENST00000462613 BRD1O95696 1058 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 LONP1P36776 959 aaKnown RBP7.14□□□□□ -1.27
SF3B1-206ENST00000462613 CCT6AP40227 531 aaKnown RBP7.14□□□□□ -1.27
SF3B1-206ENST00000462613 DNM2P50570 870 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 CDK7P50613 346 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 IGBP1P78318 339 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 CYP4A11Q02928 519 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 TBC1D8BQ0IIM8 1120 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 PTK7Q13308 1070 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 LTBP2Q14767 1821 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 GRIK4Q16099 956 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 CSPP1Q1MSJ5 1256 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 FAM126BQ8IXS8 530 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 C4orf19Q8IY42 314 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 ZNF710Q8N1W2 664 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 KCTD17Q8N5Z5 321 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 SLC43A3Q8NBI5 491 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 BANK1Q8NDB2 785 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 CAGE1Q8TC20 777 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 KCNG4Q8TDN1 519 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 SNX29Q8TEQ0 813 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 SLC7A3Q8WY07 619 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 KAT2BQ92831 832 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 GJA10Q969M2 543 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 MAP7D2Q96T17 732 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 EIF2AK1Q9BQI3 630 aaKnown RBP7.14□□□□□ -1.27
SF3B1-206ENST00000462613 LXNQ9BS40 222 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 SCAND2PQ9GZW5 306 aaPredicted RBP7.14□□□□□ -1.27
SF3B1-206ENST00000462613 RNPEPQ9H4A4 650 aa7.14□□□□□ -1.27
SF3B1-206ENST00000462613 SCN5AQ14524 2016 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 GOLGA6L4A6NEF3 574 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 DDX11L8A8MPP1 907 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 EML1O00423 815 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 PITPNM1O00562 1244 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 WNT7AO00755 349 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 GAS2O43903 313 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CAND2O75155 1236 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 PPP6R2O75170 966 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CYP2C9P11712 490 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 XRCC6P12956 609 aaKnown RBP eCLIP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 INSRRP14616 1297 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 RPA1P27694 616 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 YWHABP31946 246 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 ME1P48163 572 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 NASPP49321 788 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 POLGP54098 1239 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CDC42EP1Q00587 391 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 SPIRE1Q08AE8 756 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CTTNQ14247 550 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 SLC39A14Q15043 492 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 PLCB4Q15147 1175 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 ZRSR1Q15695 479 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 FOXD4L6Q3SYB3 417 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 MTERF2Q49AM1 385 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 XKR9Q5GH70 373 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 IER5Q5VY09 327 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 GDF6Q6KF10 455 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 FAM173BQ6P4H8 233 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 B3GNT9Q6UX72 402 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 FOXD4L3Q6VB84 417 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 TMEM199Q8N511 208 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 METTL13Q8N6R0 699 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 IGSF22Q8N9C0 903 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 KRI1Q8N9T8 703 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 LMBR1Q8WVP7 490 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 TCP11Q8WWU5 503 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CCDC34Q96HJ3 373 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 DYDC2Q96IM9 177 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CEP170P1Q96L14 293 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 SPATA32Q96LK8 384 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 NACC1Q96RE7 527 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 USP28Q96RU2 1077 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 PCYT2Q99447 389 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 PYM1Q9BRP8 204 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 POLR3CQ9BUI4 534 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 HIPK3Q9H422 1215 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 ANKEF1Q9NU02 776 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 TRMT13Q9NUP7 481 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 SETD4Q9NVD3 440 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CHMP5Q9NZZ3 219 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 RBM19Q9Y4C8 960 aaKnown RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 CLIC4Q9Y696 253 aa7.13□□□□□ -1.27
SF3B1-206ENST00000462613 MORC2Q9Y6X9 1032 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-206ENST00000462613 MICAL3Q7RTP6 2002 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 GRIN2DO15399 1336 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 ARHGEF35A5YM69 484 aa7.12□□□□□ -1.27
SF3B1-206ENST00000462613 KIAA0355O15063 1070 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms