RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 BAG4O95429 457 aaKnown RBP11.38□□□□□ -0.59
RFX3-210ENST00000457373 PSAPP07602 524 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 IGBP1P78318 339 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 PLCB4Q15147 1175 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 PLPPR4Q7Z2D5 763 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 MIER3Q7Z3K6 550 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 CCDC60Q8IWA6 550 aaPredicted RBP11.38□□□□□ -0.59
RFX3-210ENST00000457373 HSCBQ8IWL3 235 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 CKAP2LQ8IYA6 745 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 SMAP1Q8IYB5 467 aaPredicted RBP11.38□□□□□ -0.59
RFX3-210ENST00000457373 TMEM199Q8N511 208 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 RETREG2Q8NC44 543 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 ETNPPLQ8TBG4 499 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 SNX21Q969T3 373 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 SCLYQ96I15 445 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 NOC4LQ9BVI4 516 aaKnown RBP11.38□□□□□ -0.59
RFX3-210ENST00000457373 DISC1Q9NRI5 854 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 GABBR1Q9UBS5 961 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 PCDHA10Q9Y5I2 948 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 IGKV6D-21A0A0A0MT36 114 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 WDR64B1ANS9 1081 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 GNAT1P11488 350 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 MCM7P33993 719 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 FPGSQ05932 587 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 PPFIA1Q13136 1202 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 PTK7Q13308 1070 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 ZNF174Q15697 407 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 MFSD5Q6N075 450 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 NOSTRINQ8IVI9 506 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 CCDC155Q8N6L0 562 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 HAS1Q92839 578 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 FAM20AQ96MK3 541 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 CTAGE1Q96RT6 745 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 REPIN1Q9BWE0 567 aaKnown RBP11.37□□□□□ -0.59
RFX3-210ENST00000457373 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
RFX3-210ENST00000457373 NOL7Q9UMY1 257 aaKnown RBP11.37□□□□□ -0.59
RFX3-210ENST00000457373 SCN5AQ14524 2016 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 NRCAMQ92823 1304 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 TBX3O15119 743 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 NEMFO60524 1076 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 ACRP10323 421 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 INSRRP14616 1297 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 CSF2RAP15509 400 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 ATP4AP20648 1035 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 U2AF2P26368 475 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■■□□□ 13.6
RFX3-210ENST00000457373 SFNP31947 248 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 BMP8BP34820 402 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 TXKP42681 527 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 JAK3P52333 1124 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 BFSP2Q13515 415 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 GRIK4Q16099 956 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 CALCRLQ16602 461 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 TTC38Q5R3I4 469 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 NCAPH2Q6IBW4 605 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 AFAP1L1Q8TED9 768 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 LMBR1Q8WVP7 490 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 DHX38Q92620 1227 aaKnown RBP11.36□□□□□ -0.59
RFX3-210ENST00000457373 TNPO1Q92973 898 aaKnown RBP11.36□□□□□ -0.59
RFX3-210ENST00000457373 WNT8BQ93098 351 aa11.36□□□□□ -0.59
RFX3-210ENST00000457373 VPS37CA5D8V6 355 aaPredicted RBP11.35□□□□□ -0.59
RFX3-210ENST00000457373 RRN3P2A6NIE6 340 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 EML1O00423 815 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 HBP1O60381 514 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 SLC26A2P50443 739 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 EPHB4P54760 987 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 PPIGQ13427 754 aaKnown RBP eCLIP11.35□□□□□ -0.59
RFX3-210ENST00000457373 IER5LQ5T953 404 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 B3GNT9Q6UX72 402 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 SLFN12Q8IYM2 578 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 CAGE1Q8TC20 777 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 ZBTB10Q96DT7 871 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 INTS4Q96HW7 963 aaKnown RBP11.35□□□□□ -0.59
RFX3-210ENST00000457373 WNT8AQ9H1J5 351 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 TMEM60Q9H2L4 133 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 PRO3102Q9H379 93 aa11.35□□□□□ -0.59
RFX3-210ENST00000457373 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
RFX3-210ENST00000457373 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
RFX3-210ENST00000457373 HSP90AA1P07900 732 aaKnown RBP11.34□□□□□ -0.59
RFX3-210ENST00000457373 IQCF3P0C7M6 154 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 CKBP12277 381 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 HOXC8P31273 242 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 THPOP40225 353 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 ADAM17P78536 824 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 PPP2R5CQ13362 524 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 SHHQ15465 462 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 UGCGQ16739 394 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
RFX3-210ENST00000457373 HABP4Q5JVS0 413 aaKnown RBP11.34□□□□□ -0.59
RFX3-210ENST00000457373 C9orf50Q5SZB4 431 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 ZNF618Q5T7W0 954 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 LRRC8DQ7L1W4 858 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 SERINC5Q86VE9 423 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 RPUSD2Q8IZ73 545 aaKnown RBP11.34□□□□□ -0.59
RFX3-210ENST00000457373 TDHQ8IZJ6 230 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms