RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TXKP42681 527 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 PTK7Q13308 1070 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 KRT71Q3SY84 523 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 FAM186BQ8IYM0 893 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 SLC43A3Q8NBI5 491 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 TBC1D16Q8TBP0 767 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 ASCC2Q9H1I8 757 aaPredicted RBP11.62□□□□□ -0.55
LINC00342-202ENST00000448494 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 TRIM33Q9UPN9 1127 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 TSC22D4Q9Y3Q8 395 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.62□□□□□ -0.55
LINC00342-202ENST00000448494 AKAP12Q02952 1782 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 PXDNLA1KZ92 1463 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 MACROD2A1Z1Q3 448 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 DYTNA2CJ06 578 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 LCA5LO95447 670 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 FDPSP14324 419 aaKnown RBP11.62□□□□□ -0.55
LINC00342-202ENST00000448494 GALK1P51570 392 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 PTPAQ15257 358 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 CCDC6Q16204 474 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 CNGA3Q16281 694 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 DEPDC1Q5TB30 811 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 C11orf74Q86VG3 221 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 CROCCP3Q8IVE0 287 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 RIBC1Q8N443 379 aaPredicted RBP11.62□□□□□ -0.55
LINC00342-202ENST00000448494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00342-202ENST00000448494 GAB3Q8WWW8 586 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 DHX36Q9H2U1 1008 aaKnown RBP11.62□□□□□ -0.55
LINC00342-202ENST00000448494 TPK1Q9H3S4 243 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 INTS9Q9NV88 658 aaKnown RBP11.62□□□□□ -0.55
LINC00342-202ENST00000448494 ATAD3AQ9NVI7 634 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 TFR2Q9UP52 801 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 IQCA1LA6NCM1 817 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 ZSCAN5CA6NGD5 496 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 FYB1O15117 783 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 UBTFL1P0CB47 393 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 MYL6BP14649 208 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 CDC25AP30304 524 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 PPIDQ08752 370 aaKnown RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 AP1B1Q10567 949 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 B3GNT6Q6ZMB0 384 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 Q6ZNX1 250 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 DHX32Q7L7V1 743 aaKnown RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 PTF1AQ7RTS3 328 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 BPHLQ86WA6 291 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 ZBED8Q8IZ13 594 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 NUP93Q8N1F7 819 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 FITM2Q8N6M3 262 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 UHMK1Q8TAS1 419 aaKnown RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 CAPN11Q9UMQ6 739 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 XRN1Q8IZH2 1706 aaKnown RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 ADGRF5Q8IZF2 1346 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 E9PBE3 544 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 SPECC1L-ADORA2AF8WAN1 911 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 SH2B2O14492 632 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 FOXN1O15353 648 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 TAF5LO75529 589 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 CDK4P11802 303 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 ECHS1P30084 290 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 COPB1P53618 953 aaKnown RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 PPARDQ03181 441 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 TBL3Q12788 808 aaKnown RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 KRT31Q15323 416 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 SYCP2LQ5T4T6 812 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 WDR59Q6PJI9 974 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 G2E3Q7L622 706 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 TREML1Q86YW5 311 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 PASD1Q8IV76 773 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 BBS5Q8N3I7 341 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF184Q99676 751 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 SLC39A3Q9BRY0 314 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 SH2D4AQ9H788 454 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 CLK4Q9HAZ1 481 aaKnown RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 PRKAG3Q9UGI9 489 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 CCPG1Q9ULG6 757 aa11.61□□□□□ -0.55
LINC00342-202ENST00000448494 TTC7AQ9ULT0 858 aaPredicted RBP11.61□□□□□ -0.55
LINC00342-202ENST00000448494 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF142P52746 1687 aaPredicted RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 A0A0D9SFI3 127 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 A6NJR5 290 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 MAP3K7O43318 606 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 CYTH3O43739 400 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TNNC1P63316 161 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 RELAQ04206 551 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 HLTFQ14527 1009 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TTF1Q15361 905 aaPredicted RBP11.6□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF827Q17R98 1081 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 LRRC8BQ6P9F7 803 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 PPP1R42Q7Z4L9 355 aa11.6□□□□□ -0.55
LINC00342-202ENST00000448494 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms