RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SLC7A5Q01650 507 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 BTNL9Q6UXG8 535 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 RETREG2Q8NC44 543 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 PROCA1Q8NCQ7 364 aaPredicted RBP16.3■□□□□ 0.2
SF1-211ENST00000448404 ZSWIM2Q8NEG5 633 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 GAS7O60861 476 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 ITGB5P18084 799 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 CAP2P40123 477 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 PDE11AQ9HCR9 933 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 TELO2Q9Y4R8 837 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 ASTN1O14525 1302 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 ZNF646O15015 1829 aaPredicted RBP16.29■□□□□ 0.2
SF1-211ENST00000448404 ALAS1P13196 640 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 CYP2J2P51589 502 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 KNOP1Q1ED39 458 aaKnown RBP16.29■□□□□ 0.2
SF1-211ENST00000448404 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 BEND6Q5SZJ8 279 aaPredicted RBP16.29■□□□□ 0.2
SF1-211ENST00000448404 FAM84AQ96KN4 292 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 ZNF577Q9BSK1 485 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
SF1-211ENST00000448404 A0A1W2PQJ5 194 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 TBCAO75347 108 aaKnown RBP16.29■□□□□ 0.2
SF1-211ENST00000448404 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
SF1-211ENST00000448404 ERMNQ8TAM6 284 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 HOOK2Q96ED9 719 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 HSD17B14Q9BPX1 270 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 GOPCQ9HD26 462 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 CCPG1Q9ULG6 757 aa16.29■□□□□ 0.2
SF1-211ENST00000448404 FRMD3A2A2Y4 597 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 CETN3O15182 167 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 PSMD10O75832 226 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 TRIM49P0CI25 452 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 TRIM49CP0CI26 452 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 CCDC170Q8IYT3 715 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 LRRC27Q9C0I9 530 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 TGFB1I1O43294 461 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
SF1-211ENST00000448404 KLRC1P26715 233 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 PPP1R2P41236 205 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 MMP14P50281 582 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 WHAMMP3Q1A5X7 153 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 CEP55Q53EZ4 464 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 FIGNQ5HY92 759 aa16.28■□□□□ 0.2
SF1-211ENST00000448404 FGFR1OPO95684 399 aaKnown RBP16.27■□□□□ 0.2
SF1-211ENST00000448404 FOSP01100 380 aaPredicted RBP16.27■□□□□ 0.2
SF1-211ENST00000448404 NR3C1P04150 777 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 CIITAP33076 1130 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 PRKG1Q13976 671 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 ASTE1Q2TB18 679 aaPredicted RBP16.27■□□□□ 0.2
SF1-211ENST00000448404 SFMBT2Q5VUG0 894 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 RBM46Q8TBY0 533 aaKnown RBP16.27■□□□□ 0.2
SF1-211ENST00000448404 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.2
SF1-211ENST00000448404 FAM20AQ96MK3 541 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 ARMCX3Q9UH62 379 aaPredicted RBP16.27■□□□□ 0.2
SF1-211ENST00000448404 SAMM50Q9Y512 469 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 ZNF536O15090 1300 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 LRRIQ3A6PVS8 624 aaPredicted RBP16.27■□□□□ 0.2
SF1-211ENST00000448404 FAM13AO94988 1023 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 SP4Q02446 784 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 LXNQ9BS40 222 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 GLT8D2Q9H1C3 349 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 PCIF1Q9H4Z3 704 aa16.27■□□□□ 0.2
SF1-211ENST00000448404 IPO5O00410 1097 aaKnown RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 PTK2Q05397 1052 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 PAPD7Q5XG87 772 aaKnown RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 SUPT20HQ8NEM7 779 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 RANBP17Q9H2T7 1088 aaKnown RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 GPRC5CQ9NQ84 441 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 MYO1AQ9UBC5 1043 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 TMCO5BA8MYB1 307 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 HNRNPH3P31942 346 aaKnown RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 SOX10P56693 466 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 SPP2Q13103 211 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 GANQ9H2C0 597 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 MYOZ2Q9NPC6 264 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 CCDC151A5D8V7 595 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 C1orf186Q6ZWK4 172 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 EPM2AIP1Q7L775 607 aaPredicted RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 CREG2Q8IUH2 290 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
SF1-211ENST00000448404 ZKSCAN4Q969J2 545 aaPredicted RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 DMGDHQ9UI17 866 aaKnown RBP16.26■□□□□ 0.19
SF1-211ENST00000448404 ZSCAN5CA6NGD5 496 aaPredicted RBP16.25■□□□□ 0.19
SF1-211ENST00000448404 EYA4O95677 639 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 CAPN2P17655 700 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 PON1P27169 355 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 SEMA3FQ13275 785 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 MTMR2Q13614 643 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 ZNF571Q7Z3V5 609 aaPredicted RBP16.25■□□□□ 0.19
SF1-211ENST00000448404 RTKN2Q8IZC4 609 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 KCNH7Q9NS40 1196 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms