RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 TCF20Q9UGU0 1960 aaKnown RBP13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 ACTN4O43707 911 aaKnown RBP13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 EDNRBP24530 442 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 CDK7P50613 346 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 ALDH5A1P51649 535 aaPredicted RBP13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 SPIRE1Q08AE8 756 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 PPP2R5CQ13362 524 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 AAK1Q2M2I8 961 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 ZNF792Q3KQV3 632 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 HYIQ5T013 277 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 NLRX1Q86UT6 975 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 CABP7Q86V35 215 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 KLHDC9Q8NEP7 349 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 ERMNQ8TAM6 284 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 HERVK_113Q902F9 699 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 CDHR1Q96JP9 859 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 INPP4AQ96PE3 977 aaPredicted RBP13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 SDF4Q9BRK5 362 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 C11orf16Q9NQ32 467 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
AC009404.1-202ENST00000439955 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 CHD7Q9P2D1 2997 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 SYCE3A1L190 88 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 MOXD2PA6NHM9 499 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 IPO5O00410 1097 aaKnown RBP13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 PSMD10O75832 226 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 FGBP02675 491 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 ASGR1P07306 291 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 C6orf222P0C671 652 aaPredicted RBP13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 MTMR1Q13613 665 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 E2F4Q16254 413 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 KRT79Q5XKE5 535 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 HAUS3Q68CZ6 603 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 CEP57L1Q8IYX8 460 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 CALML4Q96GE6 196 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 ZNF577Q9BSK1 485 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 IL23AQ9NPF7 189 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
AC009404.1-202ENST00000439955 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 A0A087X0B3 334 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 POTEMA6NI47 508 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 GAS7O60861 476 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 ARP10275 920 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 MYCLP12524 364 aaPredicted RBP13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 CCL23P55773 120 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 STXBP2Q15833 593 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 CAMK4Q16566 473 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 B3GNT9Q6UX72 402 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 PDILTQ8N807 584 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 RASSF8Q8NHQ8 419 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 NEK9Q8TD19 979 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 MMTAG2Q9BU76 263 aaKnown RBP13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 TEKT3Q9BXF9 490 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 NT5C3AQ9H0P0 336 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 AGO4Q9HCK5 861 aaKnown RBP13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 TBC1D22BQ9NU19 505 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 FAM184BQ9ULE4 1060 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 ASTN1O14525 1302 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 NFASCO94856 1347 aa13.13□□□□□ -0.31
AC009404.1-202ENST00000439955 ZNFX1Q9P2E3 1918 aaKnown RBP13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 ARVCFO00192 962 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 ADCY6O43306 1168 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 MYL1P05976 194 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 CCDC192P0DO97 292 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 MUTP22033 750 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 ICAM3P32942 547 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 STAT6P42226 847 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 PDE4DQ08499 809 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 GSE1Q14687 1217 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 KARSQ15046 597 aaKnown RBP13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 TMEM119Q4V9L6 283 aa13.12□□□□□ -0.31
AC009404.1-202ENST00000439955 RRAGBQ5VZM2 374 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms