RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 THOC1Q96FV9 657 aaKnown RBP18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 SWAP70Q9UH65 585 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 SLC12A4Q9UP95 1085 aa18.18■□□□□ 0.5
NPC1L1-203ENST00000423141 CCDC188H7C350 402 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 BUB1BO60566 1050 aaPredicted RBP18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 KRT79Q5XKE5 535 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 DPY19L2P1Q6NXN4 242 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 FBXO33Q7Z6M2 555 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 LRRC34Q8IZ02 419 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 ATXN2LQ8WWM7 1075 aaKnown RBP18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 SEC14L1Q92503 715 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 ADAM7Q9H2U9 754 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 A0A1B0GUA9 196 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 TMEM266Q2M3C6 531 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 TMEM119Q4V9L6 283 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 CCDC63Q8NA47 563 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 NSMCE1Q8WV22 266 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 SPAG5Q96R06 1193 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 TXLNGYQ9BZA5 131 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 UBA5Q9GZZ9 404 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 CNOT10Q9H9A5 744 aaKnown RBP18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 GGT7Q9UJ14 662 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 AJAP1Q9UKB5 411 aaPredicted RBP18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 AGAP1Q9UPQ3 857 aa18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 UTP11Q9Y3A2 253 aaKnown RBP18.17■□□□□ 0.5
NPC1L1-203ENST00000423141 TLDC2A0PJX2 215 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 PPFIA2O75334 1257 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 FGGP02679 453 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 POU5F1Q01860 360 aaKnown RBP18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 NBPF9Q3BBW0 867 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 DAAM2Q86T65 1068 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 RASGEF1CQ8N431 466 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 FMO2Q99518 471 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 SPZ1Q9BXG8 430 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 SLITRK6Q9H5Y7 841 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 STXBP5LQ9Y2K9 1186 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 UCHL3P15374 230 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 IFI35P80217 286 aaPredicted RBP18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 ADAM9Q13443 819 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 CCDC26Q8TAB7 109 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 SH3RF3Q8TEJ3 882 aaPredicted RBP18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 CEP63Q96MT8 703 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 GOPCQ9HD26 462 aa18.16■□□□□ 0.5
NPC1L1-203ENST00000423141 NT5DC3Q86UY8 548 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 TAX1BP1Q86VP1 789 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 ZNF444Q8N0Y2 327 aaPredicted RBP18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 ELAC2Q9BQ52 826 aaKnown RBP18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 ABCF3Q9NUQ8 709 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 CDC25CP30307 473 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 ERFEQ4G0M1 354 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 PIGWQ7Z7B1 504 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 GLG1Q92896 1179 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 COA7Q96BR5 231 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 TRIM6Q9C030 488 aaPredicted RBP18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 KCTD10Q9H3F6 313 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 FAM114A2Q9NRY5 505 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 SEC63Q9UGP8 760 aaKnown RBP18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 SAP30BPQ9UHR5 308 aaKnown RBP18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 PCDHA2Q9Y5H9 948 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
NPC1L1-203ENST00000423141 E9PMD0 336 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 IFI16Q16666 785 aaKnown RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 NAIF1Q69YI7 327 aaPredicted RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 SLFN11Q7Z7L1 901 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 ANKS4BQ8N8V4 417 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 UHMK1Q8TAS1 419 aaKnown RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 CENPTQ96BT3 561 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 PRMT1Q99873 361 aaKnown RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 AZI2Q9H6S1 392 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 EBF2Q9HAK2 575 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 SPDYE3A6NKU9 549 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 RASA1P20936 1047 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 MMP13P45452 471 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 CRKLP46109 303 aaKnown RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 IFNAR2P48551 515 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 MARSP56192 900 aaKnown RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 KCNJ2P63252 427 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 C10orf76Q5T2E6 689 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 GJB7Q6PEY0 223 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 FOXR2Q6PJQ5 311 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 BRINP3Q76B58 766 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 TXNRD3Q86VQ6 643 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 RNF25Q96BH1 459 aaPredicted RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 ERVK-5Q9HDB9 667 aa18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 SUCLA2Q9P2R7 463 aaPredicted RBP18.14■□□□□ 0.49
NPC1L1-203ENST00000423141 PRPF4BQ13523 1007 aaKnown RBP18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 DCAF12L1Q5VU92 463 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 DZIP1Q86YF9 867 aaKnown RBP18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 AGAP11Q8TF27 550 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 ZDHHC18Q9NUE0 388 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 HDAC9Q9UKV0 1011 aa18.13■□□□□ 0.49
NPC1L1-203ENST00000423141 ANP32DO95626 131 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms