RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 GRID2IPA4D2P6 1211 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 BTNL10A8MVZ5 291 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 GLI1P08151 1106 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 MMP10P09238 476 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 BMP3P12645 472 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 EPHB4P54760 987 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 KCNA1Q09470 495 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 EMBQ6PCB8 327 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 LRRC31Q6UY01 552 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 KRT27Q7Z3Y8 459 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 RBM46Q8TBY0 533 aaKnown RBP17.43■□□□□ 0.38
HOXD3-202ENST00000410016 INPP4AQ96PE3 977 aaPredicted RBP17.43■□□□□ 0.38
HOXD3-202ENST00000410016 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 POLD4Q9HCU8 107 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 RGL1Q9NZL6 768 aa17.43■□□□□ 0.38
HOXD3-202ENST00000410016 ASTN1O14525 1302 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 IGLV3-22A0A075B6J6 115 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 PIK3CDO00329 1044 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 ECE2O60344 883 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 GH2P01242 217 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 EPHA7Q15375 998 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 EXOC3L4Q17RC7 722 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 C8orf74Q6P047 294 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 CAVIN3Q969G5 261 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 SH3GL2Q99962 352 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 HSD17B14Q9BPX1 270 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 EIF2AK1Q9BQI3 630 aaKnown RBP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 CALUO43852 315 aaPredicted RBP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 EYA4O95677 639 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 XRCC5P13010 732 aaKnown RBP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 CASP4P49662 377 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 FOXR1Q6PIV2 292 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 SLC35C1Q96A29 364 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
HOXD3-202ENST00000410016 CWC15Q9P013 229 aaKnown RBP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 PACSIN2Q9UNF0 486 aaPredicted RBP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 BZW2Q9Y6E2 419 aaKnown RBP17.42■□□□□ 0.38
HOXD3-202ENST00000410016 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 NR3C1P04150 777 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 IVLP07476 585 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 IKQ13123 557 aaPredicted RBP17.41■□□□□ 0.38
HOXD3-202ENST00000410016 C10orf76Q5T2E6 689 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 TSEN2Q8NCE0 465 aaKnown RBP17.41■□□□□ 0.38
HOXD3-202ENST00000410016 BORCS6Q96GS4 357 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 TDRD3Q9H7E2 651 aaKnown RBP17.41■□□□□ 0.38
HOXD3-202ENST00000410016 SIX2Q9NPC8 291 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 OLFML3Q9NRN5 406 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 FBXL5Q9UKA1 691 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
HOXD3-202ENST00000410016 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
HOXD3-202ENST00000410016 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 PRKCIP41743 596 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 RINT1Q6NUQ1 792 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 GOLGA6L1Q8N7Z2 621 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 NAGPAQ9UK23 515 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 OTOP1Q7RTM1 612 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 KCTD17Q8N5Z5 321 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
HOXD3-202ENST00000410016 METTL14Q9HCE5 456 aaKnown RBP17.4■□□□□ 0.38
HOXD3-202ENST00000410016 AJAP1Q9UKB5 411 aaPredicted RBP17.4■□□□□ 0.38
HOXD3-202ENST00000410016 SFI1A8K8P3 1242 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 SLC16A3O15427 465 aaKnown RBP17.39■□□□□ 0.38
HOXD3-202ENST00000410016 SLITRK3O94933 977 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 RPL13P26373 211 aaKnown RBP17.39■□□□□ 0.38
HOXD3-202ENST00000410016 DNA2P51530 1060 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 JAM2P57087 298 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 IRX5P78411 483 aaPredicted RBP17.39■□□□□ 0.38
HOXD3-202ENST00000410016 RBM26Q5T8P6 1007 aaKnown RBP17.39■□□□□ 0.38
HOXD3-202ENST00000410016 SLC30A10Q6XR72 485 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 SPICE1Q8N0Z3 855 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 TRERF1Q96PN7 1200 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 LCMT1Q9UIC8 334 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 TMEM59LQ9UK28 342 aa17.39■□□□□ 0.38
HOXD3-202ENST00000410016 ZSCAN5CA6NGD5 496 aaPredicted RBP17.39■□□□□ 0.37
HOXD3-202ENST00000410016 SHOX2O60902 331 aaPredicted RBP17.39■□□□□ 0.37
HOXD3-202ENST00000410016 ENTPD3O75355 529 aa17.39■□□□□ 0.37
HOXD3-202ENST00000410016 GCNT3O95395 438 aa17.39■□□□□ 0.37
HOXD3-202ENST00000410016 CARSP49589 748 aaKnown RBP17.39■□□□□ 0.37
HOXD3-202ENST00000410016 SLC15A2Q16348 729 aa17.39■□□□□ 0.37
HOXD3-202ENST00000410016 DCAF17Q5H9S7 520 aaPredicted RBP17.39■□□□□ 0.37
HOXD3-202ENST00000410016 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
HOXD3-202ENST00000410016 LRRC57Q8N9N7 239 aa17.39■□□□□ 0.37
HOXD3-202ENST00000410016 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
HOXD3-202ENST00000410016 PRMT6Q96LA8 375 aaPredicted RBP17.39■□□□□ 0.37
HOXD3-202ENST00000410016 WDR18Q9BV38 432 aa17.39■□□□□ 0.37
HOXD3-202ENST00000410016 GOLGA6CA6NDK9 693 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 CLIC2O15247 247 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 GOLGA6DP0CG33 693 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 ZNF76P36508 570 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 NNTQ13423 1086 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 ALS2CLQ60I27 953 aa17.38■□□□□ 0.37
HOXD3-202ENST00000410016 ALKBH5Q6P6C2 394 aaKnown RBP17.38■□□□□ 0.37
HOXD3-202ENST00000410016 C1orf186Q6ZWK4 172 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms