RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ZNF280DQ6N043 979 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 CREG2Q8IUH2 290 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.02□□□□□ -1.45
LSM5-205ENST00000409952 C9orf78Q9NZ63 289 aaPredicted RBP6.02□□□□□ -1.45
LSM5-205ENST00000409952 H2AFY2Q9P0M6 372 aaPredicted RBP6.02□□□□□ -1.45
LSM5-205ENST00000409952 NPFFR2Q9Y5X5 522 aa6.02□□□□□ -1.45
LSM5-205ENST00000409952 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.01□□□□□ -1.45
LSM5-205ENST00000409952 TGM5O43548 720 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 H2AFYO75367 372 aaKnown RBP6.01□□□□□ -1.45
LSM5-205ENST00000409952 VAMP4O75379 141 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 SRGAP2CP0DJJ0 459 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 GRK2P25098 689 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 AFMP43652 599 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 CCT5P48643 541 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 SNW1Q13573 536 aaKnown RBP6.01□□□□□ -1.45
LSM5-205ENST00000409952 ZNF267Q14586 743 aaPredicted RBP6.01□□□□□ -1.45
LSM5-205ENST00000409952 ARHGAP44Q17R89 818 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 SLC4A8Q2Y0W8 1093 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 RALGPS1Q5JS13 557 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 FYB2Q5VWT5 728 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 CCDC174Q6PII3 467 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 LBX2Q6XYB7 198 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 OVCH1Q7RTY7 1134 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 RASSF3Q86WH2 238 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 MYLK4Q86YV6 388 aaPredicted RBP6.01□□□□□ -1.45
LSM5-205ENST00000409952 NPLOC4Q8TAT6 608 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 FAM168AQ92567 244 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 PGBD4Q96DM1 585 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 PRDM14Q9GZV8 571 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 CSRNP2Q9H175 543 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 TRMT13Q9NUP7 481 aaKnown RBP6.01□□□□□ -1.45
LSM5-205ENST00000409952 PGAP2Q9UHJ9 254 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 TMEM59LQ9UK28 342 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 PCDHA11Q9Y5I1 949 aa6.01□□□□□ -1.45
LSM5-205ENST00000409952 GOLGA8AA7E2F4 631 aa6□□□□□ -1.45
LSM5-205ENST00000409952 GOLGA8BA8MQT2 603 aa6□□□□□ -1.45
LSM5-205ENST00000409952 WNT9AO14904 365 aa6□□□□□ -1.45
LSM5-205ENST00000409952 MEFVO15553 781 aaPredicted RBP6□□□□□ -1.45
LSM5-205ENST00000409952 TIMM44O43615 452 aa6□□□□□ -1.45
LSM5-205ENST00000409952 SIGLEC6O43699 453 aa6□□□□□ -1.45
LSM5-205ENST00000409952 HPXP02790 462 aa6□□□□□ -1.45
LSM5-205ENST00000409952 THBDP07204 575 aa6□□□□□ -1.45
LSM5-205ENST00000409952 ZGLP1P0C6A0 271 aa6□□□□□ -1.45
LSM5-205ENST00000409952 LTBRP36941 435 aa6□□□□□ -1.45
LSM5-205ENST00000409952 GPR3P46089 330 aa6□□□□□ -1.45
LSM5-205ENST00000409952 GTF2A2P52657 109 aa6□□□□□ -1.45
LSM5-205ENST00000409952 GEMIN4P57678 1058 aaKnown RBP6□□□□□ -1.45
LSM5-205ENST00000409952 EGR3Q06889 387 aa6□□□□□ -1.45
LSM5-205ENST00000409952 PUM3Q15397 648 aaKnown RBP6□□□□□ -1.45
LSM5-205ENST00000409952 TERF2Q15554 542 aa6□□□□□ -1.45
LSM5-205ENST00000409952 ELF2Q15723 593 aa6□□□□□ -1.45
LSM5-205ENST00000409952 DPY19L1Q2PZI1 675 aa6□□□□□ -1.45
LSM5-205ENST00000409952 ATAT1Q5SQI0 421 aa6□□□□□ -1.45
LSM5-205ENST00000409952 TMC3Q7Z5M5 1100 aa6□□□□□ -1.45
LSM5-205ENST00000409952 SKAP1Q86WV1 359 aa6□□□□□ -1.45
LSM5-205ENST00000409952 USHBP1Q8N6Y0 703 aa6□□□□□ -1.45
LSM5-205ENST00000409952 ZNF655Q8N720 491 aaPredicted RBP6□□□□□ -1.45
LSM5-205ENST00000409952 POU5F2Q8N7G0 328 aa6□□□□□ -1.45
LSM5-205ENST00000409952 PDILTQ8N807 584 aa6□□□□□ -1.45
LSM5-205ENST00000409952 ZBTB34Q8NCN2 500 aa6□□□□□ -1.45
LSM5-205ENST00000409952 PPHLN1Q8NEY8 458 aaKnown RBP6□□□□□ -1.45
LSM5-205ENST00000409952 PANK1Q8TE04 598 aa6□□□□□ -1.45
LSM5-205ENST00000409952 FRS2Q8WU20 508 aa6□□□□□ -1.45
LSM5-205ENST00000409952 COPS5Q92905 334 aa6□□□□□ -1.45
LSM5-205ENST00000409952 MPP4Q96JB8 637 aa6□□□□□ -1.45
LSM5-205ENST00000409952 SGCZQ96LD1 299 aa6□□□□□ -1.45
LSM5-205ENST00000409952 CCDC138Q96M89 665 aa6□□□□□ -1.45
LSM5-205ENST00000409952 G6PC3Q9BUM1 346 aa6□□□□□ -1.45
LSM5-205ENST00000409952 DSCC1Q9BVC3 393 aa6□□□□□ -1.45
LSM5-205ENST00000409952 ADAMTS10Q9H324 1103 aa6□□□□□ -1.45
LSM5-205ENST00000409952 TOPORSQ9NS56 1045 aaPredicted RBP6□□□□□ -1.45
LSM5-205ENST00000409952 SLAMF8Q9P0V8 285 aa6□□□□□ -1.45
LSM5-205ENST00000409952 CCDC66A2RUB6 948 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 ZNF503-AS2A6NEH8 195 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 GSTA4O15217 222 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 PQBP1O60828 265 aaKnown RBP5.99□□□□□ -1.45
LSM5-205ENST00000409952 LSP1P33241 339 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 DDIT3P35638 169 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 DNM2P50570 870 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 FAM193AP78312 1265 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 PHC1P78364 1004 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 KCTD2Q14681 263 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 NR0B2Q15466 257 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 PDCD2Q16342 344 aaPredicted RBP5.99□□□□□ -1.45
LSM5-205ENST00000409952 KIZQ2M2Z5 673 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 E4F1Q66K89 784 aaPredicted RBP5.99□□□□□ -1.45
LSM5-205ENST00000409952 OGFOD2Q6N063 350 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 RNF111Q6ZNA4 994 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 OTOP1Q7RTM1 612 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 SAPCD2Q86UD0 394 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 ZSWIM9Q86XI8 627 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 C2orf69Q8N8R5 385 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 LINC00116Q8NCU8 138 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 DIS3LQ8TF46 1054 aaKnown RBP5.99□□□□□ -1.45
LSM5-205ENST00000409952 LMBR1Q8WVP7 490 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 LINC01599Q8WXQ3 324 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 HPS3Q969F9 1004 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 FBXW5Q969U6 566 aa5.99□□□□□ -1.45
LSM5-205ENST00000409952 ACO2Q99798 780 aaKnown RBP5.99□□□□□ -1.45
LSM5-205ENST00000409952 RSAD1Q9HA92 442 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms