RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 RIOK1Q9BRS2 568 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SLC39A3Q9BRY0 314 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 TMPRSS13Q9BYE2 586 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 INO80BQ9C086 356 aaPredicted RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 OSBPL5Q9H0X9 879 aaPredicted RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CCDC68Q9H2F9 335 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 TCF7L2Q9NQB0 619 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 DISC1Q9NRI5 854 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 DDX19AQ9NUU7 478 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SEPT11Q9NVA2 429 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 FKBP14Q9NWM8 211 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 KLK14Q9P0G3 267 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 MYO1AQ9UBC5 1043 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 RABL2AQ9UBK7 228 aaPredicted RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 TUBGCP4Q9UGJ1 667 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 XPO7Q9UIA9 1087 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 MTUS1Q9ULD2 1270 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ZNF777Q9ULD5 760 aaPredicted RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 NOVA2Q9UNW9 492 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 RPL26L1Q9UNX3 145 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 FADS3Q9Y5Q0 445 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CARMIL1Q5VZK9 1371 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 PARD3Q8TEW0 1356 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ATP10AO60312 1499 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 TCOF1Q13428 1488 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ARHGAP35Q9NRY4 1499 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 MYPNQ86TC9 1320 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CUX1P39880 1505 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ABCA10Q8WWZ4 1543 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 KDM5DQ9BY66 1539 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SHROOM2Q13796 1616 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 BIVM-ERCC5R4GMW8 1640 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 A6NHS1 94 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 BECN2A8MW95 431 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 H3BRJ5 948 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CHL1O00533 1208 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 EIF3HO15372 352 aaKnown RBP eCLIP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 USO1O60763 962 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 TADA3O75528 432 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 MICAL2O94851 1124 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 FOSP01100 380 aaPredicted RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 PYGLP06737 847 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CELA3BP08861 270 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CLTAP09496 248 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 RHOXF2BP0C7M4 288 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 U2AF1L5P0DN76 240 aaPredicted RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 PTPRAP18433 802 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CD9P21926 228 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 RFX1P22670 979 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 PSMA3P25788 255 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 PIK3CAP42336 1068 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 LIG3P49916 1009 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 NLRP12P59046 1061 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 U2AF1Q01081 240 aaKnown RBP eCLIP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CYP4A11Q02928 519 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 PPIDQ08752 370 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 NSUN2Q08J23 767 aaKnown RBP eCLIP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 UBE4AQ14139 1066 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 COG2Q14746 738 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 MYBPC3Q14896 1274 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 IFI16Q16666 785 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 SLC44A4Q53GD3 710 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CYP4A22Q5TCH4 519 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 NDUFAF5Q5TEU4 345 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 VPS53Q5VIR6 699 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 ANGEL2Q5VTE6 544 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 GRAMD4Q6IC98 578 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CPLX2Q6PUV4 134 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CCDC121Q6ZUS5 278 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 NCCRP1Q6ZVX7 275 aaPredicted RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 BZW1Q7L1Q6 419 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 KRT28Q7Z3Y7 464 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 SAMD14Q8IZD0 417 aaPredicted RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 ANKS4BQ8N8V4 417 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 NSUN7Q8NE18 718 aaKnown RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 GABPB2Q8TAK5 448 aaPredicted RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 PIP4K2CQ8TBX8 421 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 BCAS4Q8TDM0 211 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 GIPC2Q8TF65 315 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 FRS2Q8WU20 508 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 EFHD2Q96C19 240 aaPredicted RBP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 STAMBPL1Q96FJ0 436 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 C8orf76Q96K31 380 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CEP19Q96LK0 163 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CATSPER2Q96P56 530 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 BPIFA3Q9BQP9 254 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 RHOXF2Q9BQY4 288 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 CENPKQ9BS16 269 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 VPS16Q9H269 839 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 ZNF304Q9HCX3 659 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.95□□□□□ -1.78
XRCC4-203ENST00000396027 GALNT8Q9NY28 637 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 UBAP1Q9NZ09 502 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 IL1RAPL1Q9NZN1 696 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 ATPIF1Q9UII2 106 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 FAM184BQ9ULE4 1060 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 L1RE1Q9UN81 338 aa3.95□□□□□ -1.78
XRCC4-203ENST00000396027 R3HDM2Q9Y2K5 976 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms