RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 EHBP1Q8NDI1 1231 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 NEK11Q8NG66 645 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 MS4A14Q96JA4 679 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 ZNHIT6Q9NWK9 470 aaKnown RBP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 ADAM21Q9UKJ8 722 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 PHF20L1A8MW92 1017 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 FGFR1OPO95684 399 aaKnown RBP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 SPATA4Q8NEY3 305 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 PCMTD1Q96MG8 357 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 TSG101Q99816 390 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 HERC5Q9UII4 1024 aaKnown RBP16.95■□□□□ 0.3
CPSF7-202ENST00000394888 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
CPSF7-202ENST00000394888 GRID2IPA4D2P6 1211 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 PDXKO00764 312 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 C21orf2O43822 256 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 FOSP01100 380 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 ARP10275 920 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 PTK2Q05397 1052 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 NFIL3Q16649 462 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 CC2D2BQ6DHV5 1058 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 KSR1Q8IVT5 923 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 LRRC57Q8N9N7 239 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 DMAC2Q9NW81 257 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 FRMPD4Q14CM0 1322 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 CLRN2A0PK11 232 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 RAD21O60216 631 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 PLA2G6O60733 806 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 CTTNQ14247 550 aaKnown RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 RBM26Q5T8P6 1007 aaKnown RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 PIGOQ8TEQ8 1089 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 INPP4AQ96PE3 977 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 SFI1A8K8P3 1242 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 DHX15O43143 795 aaKnown RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 GNA14O95837 355 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 PTGER2P43116 358 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 GHRHRQ02643 423 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 ZC2HC1CQ53FD0 456 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 MEI1Q5TIA1 1274 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 GJB7Q6PEY0 223 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 UNC45AQ9H3U1 944 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 TMEM59LQ9UK28 342 aa16.94■□□□□ 0.3
CPSF7-202ENST00000394888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.94■□□□□ 0.3
CPSF7-202ENST00000394888 BTNL10A8MVZ5 291 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 BUB1O43683 1085 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 UCHL3P15374 230 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 STAT2P52630 851 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 DGKZQ13574 1117 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 CLEC4DQ8WXI8 215 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 TMEM39BQ9GZU3 492 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 VIPAS39Q9H9C1 493 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 MCCD1P59942 119 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-202ENST00000394888 IL31RAQ8NI17 732 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 RBM12Q9NTZ6 932 aaKnown RBP16.93■□□□□ 0.3
CPSF7-202ENST00000394888 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-202ENST00000394888 FAM184BQ9ULE4 1060 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 LRRC37A2A6NM11 1700 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 TBC1D12O60347 775 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 ITGB5P18084 799 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 PRKCIP41743 596 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 HSD17B4P51659 736 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 SLC30A5Q8TAD4 765 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.93■□□□□ 0.38e-6■■□□□ 11.4
CPSF7-202ENST00000394888 PSD3Q9NYI0 1048 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 FBXL5Q9UKA1 691 aa16.93■□□□□ 0.3
CPSF7-202ENST00000394888 NMT1P30419 496 aaKnown RBP16.92■□□□□ 0.3
CPSF7-202ENST00000394888 MAGEA1P43355 309 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 SFMBT2Q5VUG0 894 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 MCTP2Q6DN12 878 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 LMO3Q8TAP4 145 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 NR3C1P04150 777 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 UBXN2AP68543 259 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 CCDC40Q4G0X9 1142 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 RNF10Q8N5U6 811 aaKnown RBP16.92■□□□□ 0.3
CPSF7-202ENST00000394888 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 TYW1Q9NV66 732 aaKnown RBP16.92■□□□□ 0.3
CPSF7-202ENST00000394888 DNM3Q9UQ16 869 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 FAN1Q9Y2M0 1017 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 TSR1Q2NL82 804 aaKnown RBP16.92■□□□□ 0.3
CPSF7-202ENST00000394888 MTMR14Q8NCE2 650 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 CNKSR1Q969H4 720 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
CPSF7-202ENST00000394888 RIN2Q8WYP3 895 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-202ENST00000394888 PSMB7Q99436 277 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 SPDYE3A6NKU9 549 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 PALMO75781 387 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 SPA17Q15506 151 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 ZNF771Q7L3S4 317 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms