RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PCDHA13Q9Y5I0 950 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 FHOD1Q9Y613 1164 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 DUSP10Q9Y6W6 482 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 DOCK1Q14185 1865 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 ZBTB39O15060 712 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 SLC16A3O15427 465 aaKnown RBP9.96□□□□□ -0.82
TDP1-202ENST00000393452 CHMP2AO43633 222 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 TLR2O60603 784 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 ZBTB7AO95365 584 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 TFRCP02786 760 aaKnown RBP9.96□□□□□ -0.82
TDP1-202ENST00000393452 BMS1Q14692 1282 aaKnown RBP9.96□□□□□ -0.82
TDP1-202ENST00000393452 TMCO3Q6UWJ1 677 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 NEK9Q8TD19 979 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 HOOK2Q96ED9 719 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 LSM14BQ9BX40 385 aaKnown RBP9.96□□□□□ -0.82
TDP1-202ENST00000393452 GANQ9H2C0 597 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 ARMCX3Q9UH62 379 aaPredicted RBP9.96□□□□□ -0.82
TDP1-202ENST00000393452 PUF60Q9UHX1 559 aaKnown RBP9.96□□□□□ -0.82
TDP1-202ENST00000393452 ODF2LQ9ULJ1 636 aa9.96□□□□□ -0.82
TDP1-202ENST00000393452 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 DHX15O43143 795 aaKnown RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 PJA2O43164 708 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 TGFB1I1O43294 461 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 USO1O60763 962 aaKnown RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 AKAP3O75969 853 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 GCNT3O95395 438 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 NR3C1P04150 777 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 ATP1A1P05023 1023 aaKnown RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 CTAGE8P0CG41 777 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 GUCY2CP25092 1073 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 RPL13P26373 211 aaKnown RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 KCNA1Q09470 495 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 PCNX4Q63HM2 1172 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 SAMD1Q6SPF0 538 aaPredicted RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 CTAGE4Q8IX94 777 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 KRT222Q8N1A0 295 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 MTFR1LQ9H019 292 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 ZSWIM4Q9H7M6 989 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 PARVGQ9HBI0 331 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 METTL14Q9HCE5 456 aaKnown RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 NLRC4Q9NPP4 1024 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 PLCB1Q9NQ66 1216 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 KCNH7Q9NS40 1196 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 AIPL1Q9NZN9 384 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 PPP1R9AQ9ULJ8 1098 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 UBIAD1Q9Y5Z9 338 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 ZMYM2Q9UBW7 1377 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 UBE4BO95155 1302 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 RLFQ13129 1914 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 CCDC151A5D8V7 595 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 POTEB2H3BUK9 544 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 FZD9O00144 591 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 ATP8B1O43520 1251 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 AKR1B10O60218 316 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 FAM13AO94988 1023 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 SERPING1P05155 500 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 PNMA6AP0CW24 399 aaPredicted RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 VCAM1P19320 739 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 POLR2FP61218 127 aaKnown RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 SLC9C1Q4G0N8 1177 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 SFMBT2Q5VUG0 894 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 CC2D1AQ6P1N0 951 aaPredicted RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 TRIM58Q8NG06 486 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 IL31RAQ8NI17 732 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 SECISBP2LQ93073 1101 aaKnown RBP9.95□□□□□ -0.82
TDP1-202ENST00000393452 BORCS6Q96GS4 357 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 LXNQ9BS40 222 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 CRACR2AQ9BSW2 395 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 DEF6Q9H4E7 631 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 ANKZF1Q9H8Y5 726 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 RAB21Q9UL25 225 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 PNMA2Q9UL42 364 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 SAR1BQ9Y6B6 198 aa9.95□□□□□ -0.82
TDP1-202ENST00000393452 ASTN2O75129 1339 aaPredicted RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 MACROD2A1Z1Q3 448 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 SFI1A8K8P3 1242 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 ENC1O14682 589 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 AFPP02771 609 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 XRCC5P13010 732 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 NMT1P30419 496 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 GMPSP49915 693 aaPredicted RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 MRPS9P82933 396 aaKnown RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 TKFCQ3LXA3 575 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 MUM1L1Q5H9M0 696 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 ZNF720Q7Z2F6 126 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 SAMD7Q7Z3H4 446 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 MYCT1Q8N699 235 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 SYTL5Q8TDW5 730 aaPredicted RBP9.94□□□□□ -0.82
TDP1-202ENST00000393452 SLC35C1Q96A29 364 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 STRA6Q9BX79 667 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 POLD4Q9HCU8 107 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 HDAC6Q9UBN7 1215 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 HACL1Q9UJ83 578 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 FBXL5Q9UKA1 691 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 FLOT1O75955 427 aa9.94□□□□□ -0.82
TDP1-202ENST00000393452 FDX1P10109 184 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms