RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 ZNF112Q9UJU3 913 aa20.42■□□□□ 0.86
STRADB-202ENST00000392249 FAM184BQ9ULE4 1060 aa20.42■□□□□ 0.86
STRADB-202ENST00000392249 EPS15P42566 896 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 ITGB3BPQ13352 177 aaPredicted RBP20.41■□□□□ 0.86
STRADB-202ENST00000392249 NSMFQ6X4W1 530 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 APOBEC3FQ8IUX4 373 aaKnown RBP20.41■□□□□ 0.86
STRADB-202ENST00000392249 ZNF280CQ8ND82 737 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 JAKMIP2Q96AA8 810 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 UBIAD1Q9Y5Z9 338 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 ZNF263O14978 683 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 DHX15O43143 795 aaKnown RBP20.41■□□□□ 0.86
STRADB-202ENST00000392249 NOL4O94818 638 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 HMGCS2P54868 508 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 APBA1Q02410 837 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 KCNH2Q12809 1159 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 MTMR1Q13613 665 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 PDXDC1Q6P996 788 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 NIPA1Q7RTP0 329 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 PURBQ96QR8 312 aaKnown RBP20.41■□□□□ 0.86
STRADB-202ENST00000392249 LACRTQ9GZZ8 138 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 AS3MTQ9HBK9 375 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 AGO4Q9HCK5 861 aaKnown RBP20.41■□□□□ 0.86
STRADB-202ENST00000392249 GGA3Q9NZ52 723 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 ARMCX3Q9UH62 379 aaPredicted RBP20.41■□□□□ 0.86
STRADB-202ENST00000392249 CDC23Q9UJX2 597 aa20.41■□□□□ 0.86
STRADB-202ENST00000392249 MYH11P35749 1972 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 CLIC2O15247 247 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 NR3C1P04150 777 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 PGM5Q15124 567 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 ZC2HC1CQ53FD0 456 aaPredicted RBP20.4■□□□□ 0.86
STRADB-202ENST00000392249 RNF207Q6ZRF8 634 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 IKZF4Q9H2S9 585 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 JADE2Q9NQC1 790 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 CEP72Q9P209 647 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 RIPK3Q9Y572 518 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 ZHX2Q9Y6X8 837 aa20.4■□□□□ 0.86
STRADB-202ENST00000392249 COL11A1P12107 1806 aaPredicted RBP20.4■□□□□ 0.86
STRADB-202ENST00000392249 ARHGEF35A5YM69 484 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 KRT86O43790 486 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 AKAP3O75969 853 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 MYCLP12524 364 aaPredicted RBP20.39■□□□□ 0.86
STRADB-202ENST00000392249 EIF4A3P38919 411 aaKnown RBP20.39■□□□□ 0.86
STRADB-202ENST00000392249 RMDN3Q96TC7 470 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 EDEM3Q9BZQ6 932 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 DEF6Q9H4E7 631 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 ZSWIM4Q9H7M6 989 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 MAP3K20Q9NYL2 800 aaKnown RBP20.39■□□□□ 0.86
STRADB-202ENST00000392249 SAMM50Q9Y512 469 aa20.39■□□□□ 0.86
STRADB-202ENST00000392249 LOXHD1Q8IVV2 1947 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 ZMYM2Q9UBW7 1377 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 TFRCP02786 760 aaKnown RBP20.39■□□□□ 0.85
STRADB-202ENST00000392249 KIF11P52732 1056 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 POLR2FP61218 127 aaKnown RBP20.39■□□□□ 0.85
STRADB-202ENST00000392249 SPA17Q15506 151 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 TEX35Q5T0J7 233 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 FRMD5Q7Z6J6 570 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 KSR1Q8IVT5 923 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 NEK9Q8TD19 979 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 GPRC5DQ9NZD1 345 aa20.39■□□□□ 0.85
STRADB-202ENST00000392249 EIF3DO15371 548 aaKnown RBP eCLIP20.38■□□□□ 0.85
STRADB-202ENST00000392249 TGFB1I1O43294 461 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 CASP4P49662 377 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 ZNF131P52739 623 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 ZNF662Q6ZS27 426 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 FIZ1Q96SL8 496 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 EPC1Q9H2F5 836 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 RNF146Q9NTX7 359 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 KCND2Q9NZV8 630 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 DUSP10Q9Y6W6 482 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 P4HBP07237 508 aaKnown RBP20.38■□□□□ 0.85
STRADB-202ENST00000392249 H2AFXP16104 143 aaPredicted RBP20.38■□□□□ 0.85
STRADB-202ENST00000392249 RPL13P26373 211 aaKnown RBP20.38■□□□□ 0.85
STRADB-202ENST00000392249 VAV2P52735 878 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 DCAF17Q5H9S7 520 aaPredicted RBP20.38■□□□□ 0.85
STRADB-202ENST00000392249 ODR4Q5SWX8 454 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 FAM178BQ8IXR5 827 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 PDCD2LQ9BRP1 358 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 PXMP2Q9NR77 195 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 PUF60Q9UHX1 559 aaKnown RBP20.38■□□□□ 0.85
STRADB-202ENST00000392249 ODF2LQ9ULJ1 636 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 RLFQ13129 1914 aa20.38■□□□□ 0.85
STRADB-202ENST00000392249 AKR1B10O60218 316 aa20.37■□□□□ 0.85
STRADB-202ENST00000392249 FDX1P10109 184 aa20.37■□□□□ 0.85
STRADB-202ENST00000392249 XRCC5P13010 732 aaKnown RBP20.37■□□□□ 0.85
STRADB-202ENST00000392249 RSRC2Q7L4I2 434 aaKnown RBP20.37■□□□□ 0.85
STRADB-202ENST00000392249 IFIH1Q9BYX4 1025 aaKnown RBP20.37■□□□□ 0.85
STRADB-202ENST00000392249 SEL1LQ9UBV2 794 aa20.37■□□□□ 0.85
STRADB-202ENST00000392249 PHIPQ8WWQ0 1821 aa20.37■□□□□ 0.85
STRADB-202ENST00000392249 ENC1O14682 589 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 HIP1RO75146 1068 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 EPB41P11171 864 aaKnown RBP20.36■□□□□ 0.85
STRADB-202ENST00000392249 ARHGEF16Q5VV41 709 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 SNRNP48Q6IEG0 339 aaKnown RBP20.36■□□□□ 0.85
STRADB-202ENST00000392249 MAEAQ7L5Y9 396 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 ZNF720Q7Z2F6 126 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 SRGAP1Q7Z6B7 1085 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 SAMD3Q8N6K7 520 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 KLRG1Q96E93 195 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 PNMA2Q9UL42 364 aa20.36■□□□□ 0.85
STRADB-202ENST00000392249 MACROD2A1Z1Q3 448 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms