RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 CCDC14Q49A88 953 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 NR3C1P04150 777 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 OR6B2Q6IFH4 312 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 RIC8AQ9NPQ8 531 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 DNAJC12Q9UKB3 198 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 ATP8A1Q9Y2Q0 1164 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 STK36Q9NRP7 1315 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 NRXN1Q9ULB1 1477 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 RGS16O15492 202 aaPredicted RBP15.8■□□□□ 0.12
PSME4-201ENST00000389993 MFAP3LO75121 409 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 GNGT1P63211 74 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 ZNF211Q13398 564 aaPredicted RBP15.8■□□□□ 0.12
PSME4-201ENST00000389993 ARL6IP4Q66PJ3 421 aaKnown RBP15.8■□□□□ 0.12
PSME4-201ENST00000389993 ANKRD40Q6AI12 368 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 UNC13DQ70J99 1090 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 ODF2LQ9ULJ1 636 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 ECE1P42892 770 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 C6orf163Q5TEZ5 329 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 NEDD1Q8NHV4 660 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 USP42Q9H9J4 1324 aaKnown RBP15.8■□□□□ 0.12
PSME4-201ENST00000389993 STXBP2Q15833 593 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 PLA2G4FQ68DD2 849 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 GGA3Q9NZ52 723 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 STK38LQ9Y2H1 464 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 CLUL1Q15846 466 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 CCNYQ8ND76 341 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 IRX2Q9BZI1 471 aaPredicted RBP15.79■□□□□ 0.12
PSME4-201ENST00000389993 MAGEF1Q9HAY2 307 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 SMYD2Q9NRG4 433 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 GYS1P13807 737 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 RPUSD2Q8IZ73 545 aaKnown RBP15.79■□□□□ 0.12
PSME4-201ENST00000389993 SNX25Q9H3E2 840 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 GMPSP49915 693 aaPredicted RBP15.79■□□□□ 0.12
PSME4-201ENST00000389993 KCNH2Q12809 1159 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 FBXO33Q7Z6M2 555 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 PALMO75781 387 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 PPP2R5AQ15172 486 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 SYCP2LQ5T4T6 812 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 SGMS1Q86VZ5 419 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 TSKSQ9UJT2 592 aa15.79■□□□□ 0.12
PSME4-201ENST00000389993 KRT1P04264 644 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 PDHBP11177 359 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 HADHQ16836 314 aaKnown RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 TMEM143Q96AN5 459 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 SMC6Q96SB8 1091 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 MMP19Q99542 508 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 STIM2Q9P246 746 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 ORC4O43929 436 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 HEXIM1O94992 359 aaKnown RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 ATF2P15336 505 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 LMNB1P20700 586 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 PHF20Q9BVI0 1012 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 ABHD10Q9NUJ1 306 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 SPDYE16A6NNV3 312 aaPredicted RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 EFCAB8A8MWE9 144 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 PSMD6Q15008 389 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 ABI1Q8IZP0 508 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 NBPF3Q9H094 633 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 RAB17Q9H0T7 212 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 CDC23Q9UJX2 597 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 KIAA1210Q9ULL0 1709 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 HIP1RO75146 1068 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 ZC2HC1CQ53FD0 456 aaPredicted RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 SRGAP1Q7Z6B7 1085 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 HACE1Q8IYU2 909 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 TMEM206Q9H813 350 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 RPF1Q9H9Y2 349 aaKnown RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 SNX16P57768 344 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 PRMT6Q96LA8 375 aaPredicted RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 ZNF302Q9NR11 478 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 TRIM10Q9UDY6 481 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 CHORDC1Q9UHD1 332 aaPredicted RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 ACTN1P12814 892 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 YWHAEP62258 255 aaKnown RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 OR6B3Q8NGW1 331 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 POLR3FQ9H1D9 316 aaPredicted RBP15.78■□□□□ 0.12
PSME4-201ENST00000389993 ZNRF3Q9ULT6 936 aa15.78■□□□□ 0.12
PSME4-201ENST00000389993 RNF8O76064 485 aa15.77■□□□□ 0.12
PSME4-201ENST00000389993 SETDB1Q15047 1291 aa15.77■□□□□ 0.12
PSME4-201ENST00000389993 PPP1R18Q6NYC8 613 aa15.77■□□□□ 0.12
PSME4-201ENST00000389993 CCDC125Q86Z20 511 aa15.77■□□□□ 0.12
PSME4-201ENST00000389993 KDM4FA0A1W2PPD8 638 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 hCG_1984214I3L0E3 225 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 BNIP3LO60238 219 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 SERPING1P05155 500 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 MYBP10242 640 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 ZNF543Q08ER8 600 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 ZNF713Q8N859 430 aaPredicted RBP15.77■□□□□ 0.11
PSME4-201ENST00000389993 STXBP3O00186 592 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 ATP2C1P98194 919 aaPredicted RBP15.77■□□□□ 0.11
PSME4-201ENST00000389993 SGO2Q562F6 1265 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 RSBN1LQ6PCB5 846 aaPredicted RBP15.77■□□□□ 0.11
PSME4-201ENST00000389993 GOLGA8MH3BSY2 632 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 CATSPER4Q7RTX7 472 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 C2orf69Q8N8R5 385 aa15.77■□□□□ 0.11
PSME4-201ENST00000389993 HOXC10Q9NYD6 342 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms