RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 GOLGA8RI6L899 631 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 RNF8O76064 485 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 TNNC2P02585 160 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 SERPING1P05155 500 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 PDE1BQ01064 536 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 GNPTABQ3T906 1256 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 EPC2Q52LR7 807 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 GPATCH4Q5T3I0 446 aaKnown RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 RAD9BQ6WBX8 426 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 LMNTD2Q8IXW0 634 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 SKA2Q8WVK7 121 aaPredicted RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 MAML1Q92585 1016 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 PLEKHG1Q9ULL1 1385 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 BNIP3LO60238 219 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 HIP1RO75146 1068 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 PPFIA2O75334 1257 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 PPFIA4O75335 1185 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 SPAG7O75391 227 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TOM1L1O75674 476 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 SLC12A2P55011 1212 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 EXOSC10Q01780 885 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 C2CD6Q53TS8 623 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 BRDTQ58F21 947 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 PDXDC2PQ6P474 469 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 SRRM1Q8IYB3 904 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 CCDC197Q8NCU1 140 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 EXT2Q93063 718 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 KLHL29Q96CT2 875 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 FAM213AQ9BRX8 229 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TMEM60Q9H2L4 133 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 EPB41L4AQ9HCS5 686 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 CD209Q9NNX6 404 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 NGRNQ9NPE2 291 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 LIMA1Q9UHB6 759 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 LEMD3Q9Y2U8 911 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 HEY1Q9Y5J3 304 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 PREX2Q70Z35 1606 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 CLASP1Q7Z460 1538 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 LGALS16A8MUM7 142 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 CFLARO15519 480 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 ATMINO43313 823 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 GSTA1P08263 222 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 INHBAP08476 426 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 GSTA2P09210 222 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TROVE2P10155 538 aaKnown RBP eCLIP5.39□□□□□ -1.55
LTN1-202ENST00000389194 CHRNA5P30532 468 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TRAPPC10P48553 1259 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 STK4Q13043 487 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 GJB7Q6PEY0 223 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 EP400NLQ6ZTU2 488 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 RYBPQ8N488 228 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 NOA1Q8NC60 698 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 ATXN7L3BQ96GX2 97 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 OSBPL9Q96SU4 736 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 RIOK1Q9BRS2 568 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 ZNF277Q9NRM2 450 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 FBXO2Q9UK22 296 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 PNMA6FA0A0J9YX94 578 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 SMIM22K7EJ46 135 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 LMNB1P20700 586 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 FGFR4P22455 802 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 MFAP3P55082 362 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 GPSM2P81274 684 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 HABP4Q5JVS0 413 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 C11orf70Q9BRQ4 267 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 A0A0G2JND7 137 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 GOLGA8CPA6NN73 597 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 STK10O94804 968 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 RPS6KA2Q15349 733 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 SNCBQ16143 134 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 OR6B2Q6IFH4 312 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 PPP1R18Q6NYC8 613 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 DARS2Q6PI48 645 aaKnown RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 ZBTB8OSQ8IWT0 167 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 CDAN1Q8IWY9 1227 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 MIPOL1Q8TD10 442 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 IGDCC4Q8TDY8 1250 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 THAP9Q9H5L6 903 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.39□□□□□ -1.552e-6■■■□□ 16.7
LTN1-202ENST00000389194 ZBTB12Q9Y330 459 aaPredicted RBP5.39□□□□□ -1.55
LTN1-202ENST00000389194 TACC3Q9Y6A5 838 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 EXOC1LA0A1B0GW35 172 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 CHD1O14646 1710 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TRPA1O75762 1119 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 ECEL1O95672 775 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 KRT14P02533 472 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 NR3C1P04150 777 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 ECE1P42892 770 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 NFIXQ14938 502 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 MDH1BQ5I0G3 518 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 SARM1Q6SZW1 724 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 DNAAF3Q8N9W5 541 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 KCTD6Q8NC69 237 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 SLC7A3Q8WY07 619 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TTC17Q96AE7 1141 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 FAM167BQ9BTA0 163 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 ZMYND12Q9H0C1 365 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 PI4KBQ9UBF8 816 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms