RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 RUSC1Q9BVN2 902 aa12□□□□□ -0.49
BEST1-201ENST00000378043 GOLGA6AQ9NYA3 693 aa12□□□□□ -0.49
BEST1-201ENST00000378043 RRP15Q9Y3B9 282 aaKnown RBP12□□□□□ -0.49
BEST1-201ENST00000378043 ASTN1O14525 1302 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 PDXKO00764 312 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 TRIM37O94972 964 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 FAM153BP0C7A2 387 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 CIITAP33076 1130 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 EPHA7Q15375 998 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 TRADDQ15628 312 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 FAM153CQ494X1 144 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 SLC30A10Q6XR72 485 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 PODNQ7Z5L7 613 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 FBXO11Q86XK2 927 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 BHMT2Q9H2M3 363 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 IKZF4Q9H2S9 585 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 GOLPH3Q9H4A6 298 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 SIX2Q9NPC8 291 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
BEST1-201ENST00000378043 RGL1Q9NZL6 768 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 FAM153AQ9UHL3 310 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 G3V3G9 751 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 AFPP02771 609 aaKnown RBP11.99□□□□□ -0.49
BEST1-201ENST00000378043 RNASE9P60153 205 aaKnown RBP11.99□□□□□ -0.49
BEST1-201ENST00000378043 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
BEST1-201ENST00000378043 BMT2Q1RMZ1 405 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 DACT2Q5SW24 774 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 TMEM179Q6ZVK1 233 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 GMCL1P1Q8NEA9 526 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 ERMNQ8TAM6 284 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 FAM76AQ8TAV0 307 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 SLC35C1Q96A29 364 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 ARL8AQ96BM9 186 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 GMCL1Q96IK5 515 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 FAM20AQ96MK3 541 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 MRIQ9BWK5 157 aa11.99□□□□□ -0.49
BEST1-201ENST00000378043 SPDYE3A6NKU9 549 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 BTNL10A8MVZ5 291 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 HEXIM1O94992 359 aaKnown RBP11.98□□□□□ -0.49
BEST1-201ENST00000378043 ZBTB48P10074 688 aaPredicted RBP11.98□□□□□ -0.49
BEST1-201ENST00000378043 XRCC5P13010 732 aaKnown RBP11.98□□□□□ -0.49
BEST1-201ENST00000378043 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 EPB41L5Q9HCM4 733 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 NAGPAQ9UK23 515 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 TMEM59LQ9UK28 342 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 NFU1Q9UMS0 254 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 NENFQ9UMX5 172 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 SLX4Q8IY92 1834 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 IGLV3-22A0A075B6J6 115 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 A0A1W2PRG0 241 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 NR3C1P04150 777 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 ALDH1B1P30837 517 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 GUCY2DQ02846 1103 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 IQCKQ8N0W5 287 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 LRRC57Q8N9N7 239 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 BORCS6Q96GS4 357 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 KRT12Q99456 494 aa11.98□□□□□ -0.49
BEST1-201ENST00000378043 EIF2AK1Q9BQI3 630 aaKnown RBP11.98□□□□□ -0.49
BEST1-201ENST00000378043 RBBP6Q7Z6E9 1792 aaKnown RBP11.97□□□□□ -0.49
BEST1-201ENST00000378043 SFI1A8K8P3 1242 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 TGFB1I1O43294 461 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 PPFIA4O75335 1185 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 FOSP01100 380 aaPredicted RBP11.97□□□□□ -0.49
BEST1-201ENST00000378043 EPB41P11171 864 aaKnown RBP11.97□□□□□ -0.49
BEST1-201ENST00000378043 PRKCIP41743 596 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 RBM5P52756 815 aaKnown RBP eCLIP11.97□□□□□ -0.49
BEST1-201ENST00000378043 JAM2P57087 298 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 ABCB5Q2M3G0 1257 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 DCAF17Q5H9S7 520 aaPredicted RBP11.97□□□□□ -0.49
BEST1-201ENST00000378043 ALS2CLQ60I27 953 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 GJB7Q6PEY0 223 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 IFT20Q8IY31 132 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 USP38Q8NB14 1042 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 ZIM3Q96PE6 472 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 SPAG5Q96R06 1193 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 TYW1Q9NV66 732 aaKnown RBP11.97□□□□□ -0.49
BEST1-201ENST00000378043 TMEM51Q9NW97 253 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 RSPH14Q9UHP6 348 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 ZMYM2Q9UBW7 1377 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 CLIC2O15247 247 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 IRAK1P51617 712 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 NNTQ13423 1086 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 STRIP1Q5VSL9 837 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 MCTP2Q6DN12 878 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 RINT1Q6NUQ1 792 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
BEST1-201ENST00000378043 OLIG1Q8TAK6 271 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 CASKIN2Q8WXE0 1202 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 PIK3R5Q8WYR1 880 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 HSD17B14Q9BPX1 270 aa11.97□□□□□ -0.49
BEST1-201ENST00000378043 POLR3CQ9BUI4 534 aaPredicted RBP11.97□□□□□ -0.49
BEST1-201ENST00000378043 ZBTB39O15060 712 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
BEST1-201ENST00000378043 GCNT3O95395 438 aa11.96□□□□□ -0.49
BEST1-201ENST00000378043 EYA4O95677 639 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms