RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
HMGCL-202ENST00000374487 PEX10O60683 326 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 GNA14O95837 355 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 CYP2C8P10632 490 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 PSMC6P62333 389 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 CDK17Q00537 523 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 MTMR2Q13614 643 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 SPA17Q15506 151 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 ARSHQ5FYA8 562 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
HMGCL-202ENST00000374487 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 TRIM10Q9UDY6 481 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 SIK3Q9Y2K2 1263 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 PHIPQ8WWQ0 1821 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 EIF3CLB5ME19 914 aaKnown RBP13.34□□□□□ -0.27
HMGCL-202ENST00000374487 GCOM1H8Y6P7 765 aaPredicted RBP13.34□□□□□ -0.27
HMGCL-202ENST00000374487 CYP3A4P08684 503 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 POLR2MP0CAP2 368 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 SPATA31C1P0DKV0 1188 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 CETPP11597 493 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 HERVK_113P62684 666 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
HMGCL-202ENST00000374487 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 NEK11Q8NG66 645 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 JAKMIP2Q96AA8 810 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 CEP63Q96MT8 703 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 EIF3CQ99613 913 aaKnown RBP13.34□□□□□ -0.27
HMGCL-202ENST00000374487 FGFBP2Q9BYJ0 223 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 ZNF446Q9NWS9 450 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 PLAGL2Q9UPG8 496 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 ATAD5Q96QE3 1844 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 A0A0G2JLL6 359 aaPredicted RBP13.34□□□□□ -0.27
HMGCL-202ENST00000374487 PRRT2Q7Z6L0 340 aaPredicted RBP13.34□□□□□ -0.27
HMGCL-202ENST00000374487 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 SYT2Q8N9I0 419 aaPredicted RBP13.34□□□□□ -0.27
HMGCL-202ENST00000374487 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 EPC1Q9H2F5 836 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 DEF6Q9H4E7 631 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
HMGCL-202ENST00000374487 PDHXO00330 501 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 ASNSP08243 561 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 INHBEP58166 350 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 TUBB4BP68371 445 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 ADAM9Q13443 819 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 RRAGAQ7L523 313 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
HMGCL-202ENST00000374487 EHMT1Q9H9B1 1298 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 MYO6Q9UM54 1294 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 MRPL11Q9Y3B7 192 aaKnown RBP13.33□□□□□ -0.28
HMGCL-202ENST00000374487 CASP8AP2Q9UKL3 1982 aa13.33□□□□□ -0.28
HMGCL-202ENST00000374487 FRMD3A2A2Y4 597 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 CXCL11O14625 94 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 EPHB6O15197 1021 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 HNRNPH3P31942 346 aaKnown RBP13.32□□□□□ -0.28
HMGCL-202ENST00000374487 CYP27A1Q02318 531 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 KIF5AQ12840 1032 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 GIT2Q14161 759 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
HMGCL-202ENST00000374487 WHAMMP3Q1A5X7 153 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 ZNF662Q6ZS27 426 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 TBC1D5Q92609 795 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 EIF2AK1Q9BQI3 630 aaKnown RBP13.32□□□□□ -0.28
HMGCL-202ENST00000374487 PARD6BQ9BYG5 372 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 BHMT2Q9H2M3 363 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 RANBP17Q9H2T7 1088 aaKnown RBP13.32□□□□□ -0.28
HMGCL-202ENST00000374487 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGCL-202ENST00000374487 CETN3O15182 167 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 CCDC155Q8N6L0 562 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 SMCR8Q8TEV9 937 aaPredicted RBP13.32□□□□□ -0.28
HMGCL-202ENST00000374487 REEP2Q9BRK0 252 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 POLR3CQ9BUI4 534 aaPredicted RBP13.32□□□□□ -0.28
HMGCL-202ENST00000374487 KCTD10Q9H3F6 313 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 SAGE1Q9NXZ1 904 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 CPA4Q9UI42 421 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
HMGCL-202ENST00000374487 IGLV3-22A0A075B6J6 115 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 CTAGE15A4D2H0 777 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 LRRC53A6NM62 1247 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 GPR25O00155 361 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 AKR1B10O60218 316 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 USO1O60763 962 aaKnown RBP13.31□□□□□ -0.28
HMGCL-202ENST00000374487 TBCAO75347 108 aaKnown RBP13.31□□□□□ -0.28
HMGCL-202ENST00000374487 CTAGE8P0CG41 777 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 EDRF1Q3B7T1 1238 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 LRCH2Q5VUJ6 765 aa13.31□□□□□ -0.28
HMGCL-202ENST00000374487 CTAGE6Q86UF2 777 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms