RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 USP17L11C9JVI0 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L18D6R9N7 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L22D6RA61 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L17D6RBQ6 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L19D6RCP7 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L20D6RJB6 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 F8W031 263 aaPredicted RBP19.36■□□□□ 0.69
VPS26A-202ENST00000373382 RASSF9O75901 435 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 VIMP08670 466 aaKnown RBP19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L24Q0WX57 530 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 USP17L6PQ6QN14 398 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 BCAS3Q9H6U6 928 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 SFI1A8K8P3 1242 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 TMEM110-MUSTN1A8MSY1 372 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 FLOT1O75955 427 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 ZCWPW2Q504Y3 356 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 TPCN2Q8NHX9 752 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 SCFD2Q8WU76 684 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 SETDB2Q96T68 719 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 PSMD1Q99460 953 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 SNX24Q9Y343 169 aa19.36■□□□□ 0.69
VPS26A-202ENST00000373382 ABCB11O95342 1321 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 MPHOSPH10O00566 681 aaKnown RBP19.35■□□□□ 0.69
VPS26A-202ENST00000373382 SHBGP04278 402 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 C6orf89Q6UWU4 347 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 GANQ9H2C0 597 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 IKZF4Q9H2S9 585 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.35■□□□□ 0.698e-9■■■■■ 96.2
VPS26A-202ENST00000373382 XRCC5P13010 732 aaKnown RBP19.35■□□□□ 0.69
VPS26A-202ENST00000373382 EZRP15311 586 aaKnown RBP19.35■□□□□ 0.69
VPS26A-202ENST00000373382 CYP4A11Q02928 519 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 BIRC3Q13489 604 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 COBLL1Q53SF7 1204 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 LRIG3Q6UXM1 1119 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 IRF2BP2Q7Z5L9 587 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 VPS36Q86VN1 386 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 MGARPQ8TDB4 240 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 SYN2Q92777 582 aaPredicted RBP19.35■□□□□ 0.69
VPS26A-202ENST00000373382 FMO2Q99518 471 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 ANKRD2Q9GZV1 360 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 AIPL1Q9NZN9 384 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 CD2APQ9Y5K6 639 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 CASZ1Q86V15 1759 aa19.35■□□□□ 0.69
VPS26A-202ENST00000373382 BUB1BO60566 1050 aaPredicted RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 KCTD1Q719H9 257 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 TMC3Q7Z5M5 1100 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 RBM46Q8TBY0 533 aaKnown RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 HAS1Q92839 578 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 CHORDC1Q9UHD1 332 aaPredicted RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 GBP2P32456 591 aaPredicted RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 ELF1P32519 619 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 CASP4P49662 377 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 DDR1Q08345 913 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 NBPF9Q3BBW0 867 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 CCDC38Q502W7 563 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 CCDC25Q86WR0 208 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 GLYCTKQ8IVS8 523 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 AJAP1Q9UKB5 411 aaPredicted RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 SRCAPQ6ZRS2 3230 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 LRP5O75197 1615 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 EDIL3O43854 480 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 SLURP2P0DP57 97 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 MTMR3Q13615 1198 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 TBC1D1Q86TI0 1168 aaPredicted RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 SGSM3Q96HU1 749 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 CEP63Q96MT8 703 aa19.34■□□□□ 0.69
VPS26A-202ENST00000373382 ELAC2Q9BQ52 826 aaKnown RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 ACTR5Q9H9F9 607 aaPredicted RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
VPS26A-202ENST00000373382 GNA14O95837 355 aa19.33■□□□□ 0.69
VPS26A-202ENST00000373382 PDIA5Q14554 519 aa19.33■□□□□ 0.69
VPS26A-202ENST00000373382 WDR66Q8TBY9 1149 aa19.33■□□□□ 0.69
VPS26A-202ENST00000373382 TMOD4Q9NZQ9 345 aa19.33■□□□□ 0.69
VPS26A-202ENST00000373382 GCNT4Q9P109 453 aa19.33■□□□□ 0.69
VPS26A-202ENST00000373382 TMEM59LQ9UK28 342 aa19.33■□□□□ 0.69
VPS26A-202ENST00000373382 AMFRQ9UKV5 643 aa19.33■□□□□ 0.69
VPS26A-202ENST00000373382 AFPP02771 609 aaKnown RBP19.33■□□□□ 0.68
VPS26A-202ENST00000373382 MMEP08473 750 aa19.33■□□□□ 0.68
VPS26A-202ENST00000373382 CHN1P15882 459 aa19.33■□□□□ 0.68
VPS26A-202ENST00000373382 CLNS1AP54105 237 aaKnown RBP19.33■□□□□ 0.68
VPS26A-202ENST00000373382 NFIXQ14938 502 aa19.33■□□□□ 0.68
VPS26A-202ENST00000373382 NAA25Q14CX7 972 aa19.33■□□□□ 0.68
VPS26A-202ENST00000373382 AADACL2Q6P093 401 aa19.33■□□□□ 0.68
VPS26A-202ENST00000373382 NEDD1Q8NHV4 660 aa19.33■□□□□ 0.68
VPS26A-202ENST00000373382 VEZTQ9HBM0 779 aa19.33■□□□□ 0.68
VPS26A-202ENST00000373382 F8VZ95 297 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 PON1P27169 355 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 PSMC6P62333 389 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 TMEM119Q4V9L6 283 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
VPS26A-202ENST00000373382 ACTRT1Q8TDG2 376 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 ATXN2Q99700 1313 aaKnown RBP19.32■□□□□ 0.68
VPS26A-202ENST00000373382 GALCP54803 685 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 SFR1Q86XK3 245 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 CHMP6Q96FZ7 201 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 MLXIPLQ9NP71 852 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 MYBP10242 640 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 KCNA1Q09470 495 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 ARHGAP44Q17R89 818 aa19.32■□□□□ 0.68
VPS26A-202ENST00000373382 LRRC57Q8N9N7 239 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms