RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZFYVE1Q9HBF4 777 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
COL5A1-201ENST00000371817 NLRP9Q7RTR0 991 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 UBN1Q9NPG3 1134 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 PCF11O94913 1555 aaKnown RBP16.32■□□□□ 0.2
COL5A1-201ENST00000371817 CYFIP2Q96F07 1278 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 CCT8L2Q96SF2 557 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 PRMT1Q99873 361 aaKnown RBP16.32■□□□□ 0.2
COL5A1-201ENST00000371817 SAYSD1Q9NPB0 183 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 MBD2Q9UBB5 411 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 FAM135BQ49AJ0 1406 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 ANP32DO95626 131 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 SCP2P22307 547 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 KLHL38Q2WGJ6 581 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 FAM133AQ8N9E0 248 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 CCNYQ8ND76 341 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 SNX19Q92543 992 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 SYTL2Q9HCH5 934 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 ABCC5O15440 1437 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 E7ENQ6 273 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 RFC4P35249 363 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 MAPRE2Q15555 327 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 RNPEPQ9H4A4 650 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 GTSE1Q9NYZ3 720 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 NDUFA13Q9P0J0 144 aa16.32■□□□□ 0.2
COL5A1-201ENST00000371817 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-201ENST00000371817 VAMP4O75379 141 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 CDH2P19022 906 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 EIF2B2P49770 351 aaKnown RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 PTGDRQ13258 359 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 TRIM71Q2Q1W2 868 aaKnown RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 CALN1Q9BXU9 219 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 PPP6R2O75170 966 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 DSG1Q02413 1049 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 DNAL1Q4LDG9 190 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 ARHGAP22Q7Z5H3 698 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 BBS5Q8N3I7 341 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 VPS39Q96JC1 886 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 AGBL1Q96MI9 1066 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 PIK3R2O00459 728 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 PMS2P54278 862 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 OR52Z1P0C646 297 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 NR2F2P24468 414 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 FAM102BQ5T8I3 360 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 SOX13Q9UN79 622 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 FRA10AC1Q70Z53 315 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 KBTBD3Q8NAB2 608 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 ZNF263O14978 683 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 ZNF189O75820 626 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 BRAFP15056 766 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 ANGPT1Q15389 498 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 BBS9Q3SYG4 887 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 USH1GQ495M9 461 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 ARHGEF25Q86VW2 580 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 C19orf60Q96EN9 201 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 SAP30BPQ9UHR5 308 aaKnown RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 DNALI1O14645 258 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
COL5A1-201ENST00000371817 ARL4CP56559 192 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 CORO7P57737 925 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 IGBP1P78318 339 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 ZCWPW2Q504Y3 356 aa16.31■□□□□ 0.2
COL5A1-201ENST00000371817 SLC1A4P43007 532 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 TNNI3KQ59H18 835 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 MAGED2Q9UNF1 606 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 FPGT-TNNI3KV9GXZ4 949 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 WDR64B1ANS9 1081 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 TOMM70O94826 608 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 HNRNPH1P31943 449 aaKnown RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 ZNF658Q5TYW1 1059 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 ZNF473Q8WTR7 871 aaKnown RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 GOLGA8RI6L899 631 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 ACADSP16219 412 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 CDC27P30260 824 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 OTUB1Q96FW1 271 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 GPR101Q96P66 508 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 MYL1P05976 194 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 ATP2B4P23634 1241 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 GALNT17Q6IS24 598 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
COL5A1-201ENST00000371817 RYBPQ8N488 228 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-201ENST00000371817 SLC17A8Q8NDX2 589 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms