RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 PHLDB2Q86SQ0 1253 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 CEP170P1Q96L14 293 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 FAM20AQ96MK3 541 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 CYP2C19P33261 490 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 MAN1A1P33908 653 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 ITIH3Q06033 890 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 CLEC10AQ8IUN9 316 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 FLT1P17948 1338 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 MYMKA6NI61 221 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 RAD17O75943 681 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 RASA1P20936 1047 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 MAP2K2P36507 400 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 KLK7P49862 253 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 ADCY1Q08828 1119 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 NEDD9Q14511 834 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 PDIA5Q14554 519 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 APBB1IPQ7Z5R6 666 aaPredicted RBP12.65□□□□□ -0.38
COPA-202ENST00000368069 ZBTB8OSQ8IWT0 167 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 NOA1Q8NC60 698 aaKnown RBP12.65□□□□□ -0.38
COPA-202ENST00000368069 TACO1Q9BSH4 297 aaKnown RBP12.65□□□□□ -0.38
COPA-202ENST00000368069 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
COPA-202ENST00000368069 FGFR2P21802 821 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 EDEM3Q9BZQ6 932 aa12.65□□□□□ -0.38
COPA-202ENST00000368069 NPHP3-ACAD11A0A0J9YXS1 232 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 I3L4J1 428 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 HADHQ16836 314 aaKnown RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 ANKRD20A3Q5VUR7 823 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 RHOT2Q8IXI1 618 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 TRIM11Q96F44 468 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 DYDC2Q96IM9 177 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 DDX47Q9H0S4 455 aaKnown RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 CNOT10Q9H9A5 744 aaKnown RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 PNMA2Q9UL42 364 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 PDS5AQ29RF7 1337 aaKnown RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 POC1B-GALNT4F8VUJ3 575 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 TROVE2P10155 538 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■□□□□ 9.2
COPA-202ENST00000368069 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 KLRK1P26718 216 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 TMOD1P28289 359 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 PHBP35232 272 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 LGSNQ5TDP6 509 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 SNX24Q9Y343 169 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 TMEM191BP0C7N4 346 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 EIF3BP55884 814 aaKnown RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 TRIP13Q15645 432 aaPredicted RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 CYP4F22Q6NT55 531 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 ANKRD35Q8N283 1001 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 MARCH10Q8NA82 808 aaPredicted RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 GRID2IPA4D2P6 1211 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 SUN1O94901 812 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 TNNC2P02585 160 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 PRELPP51888 382 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 SLC8A3P57103 927 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 ERVK-24P63145 666 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 RASA3Q14644 834 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 CASC4Q6P4E1 433 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 FAM160B2Q86V87 743 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 VPS52Q8N1B4 723 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 METTL13Q8N6R0 699 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 LINC00116Q8NCU8 138 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
COPA-202ENST00000368069 CD2APQ9Y5K6 639 aa12.64□□□□□ -0.39
COPA-202ENST00000368069 TCRBV5S4A2TA0A5A2 114 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 F5H6K3 240 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 PSMD14O00487 310 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 RASGRF2O14827 1237 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 KLRC3Q07444 240 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 SNCBQ16143 134 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 BANK1Q8NDB2 785 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 TDRD3Q9H7E2 651 aaKnown RBP12.63□□□□□ -0.39
COPA-202ENST00000368069 ANAPC5Q9UJX4 755 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 MMP10P09238 476 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 H2AFXP16104 143 aaPredicted RBP12.63□□□□□ -0.39
COPA-202ENST00000368069 HSPA1LP34931 641 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 PEX3P56589 373 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 SNX16P57768 344 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 SEC23AQ15436 765 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
COPA-202ENST00000368069 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 DAGLAQ9Y4D2 1042 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
COPA-202ENST00000368069 MAGEA9P43362 315 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 GCLMP48507 274 aa12.63□□□□□ -0.39
COPA-202ENST00000368069 ALCAMQ13740 583 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms