RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 HOXD13P35453 343 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 TUBB4BP68371 445 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 MUM1L1Q5H9M0 696 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 MYCT1Q8N699 235 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 CEP112Q8N8E3 955 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 LRRN4CLQ8ND94 238 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 BAP1Q92560 729 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 JAKMIP2Q96AA8 810 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 C12orf42Q96LP6 360 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 LXNQ9BS40 222 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 AGO4Q9HCK5 861 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 TBC1D22BQ9NU19 505 aa20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 ARMCX3Q9UH62 379 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-203ENST00000359895 ARHGEF35A5YM69 484 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 VWA5AO00534 786 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 EPHB6O15197 1021 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 P4HBP07237 508 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 PTPRAP18433 802 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 ZNF131P52739 623 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 OAZ1P54368 228 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 CCDC122Q5T0U0 273 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 ANGEL2Q5VTE6 544 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 XRRA1Q6P2D8 792 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 RRAGAQ7L523 313 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 TXLNBQ8N3L3 684 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 SMCR8Q8TEV9 937 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 TRERF1Q96PN7 1200 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 WRNIP1Q96S55 665 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 GUCA1BQ9UMX6 200 aa20.14■□□□□ 0.81
PDLIM7-203ENST00000359895 LRRC53A6NM62 1247 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 LCA5LO95447 670 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 NR3C1P04150 777 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 VAV2P52735 878 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 SLC30A10Q6XR72 485 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 ZFP91Q96JP5 570 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 LSM14BQ9BX40 385 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 MAF1Q9H063 256 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 ZSWIM4Q9H7M6 989 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 ASTN1O14525 1302 aa20.13■□□□□ 0.81
PDLIM7-203ENST00000359895 SSU72P8A0A1W2PR75 194 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 DHX15O43143 795 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 USO1O60763 962 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 EPB41P11171 864 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 YY1P25490 414 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 RPS6P62753 249 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 KCNH2Q12809 1159 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 MAPK8IP2Q13387 824 aaPredicted RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 DGKZQ13574 1117 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 MTMR1Q13613 665 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 PGM5Q15124 567 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 IL31RAQ8NI17 732 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 TAAR1Q96RJ0 339 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 DEF6Q9H4E7 631 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 HOMER2Q9NSB8 354 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 GPRC5DQ9NZD1 345 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 ARHGAP20Q9P2F6 1191 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 DBR1Q9UK59 544 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 WDR81Q562E7 1941 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 LYPLA2O95372 231 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 ABL1P00519 1130 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 MRPS9P82933 396 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 KIF5AQ12840 1032 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 WHAMMP3Q1A5X7 153 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 RSRC2Q7L4I2 434 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 SRGAP1Q7Z6B7 1085 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 GOLGA1Q92805 767 aa20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 ARGLU1Q9NWB6 273 aaPredicted RBP20.12■□□□□ 0.81
PDLIM7-203ENST00000359895 XRCC5P13010 732 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 H2AFXP16104 143 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 ERCC3P19447 782 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 KIF11P52732 1056 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 SFMBT2Q5VUG0 894 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 FBXO38Q6PIJ6 1188 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 FAM178BQ8IXR5 827 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 GPC2Q8N158 579 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 GPR161Q8N6U8 529 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 BANK1Q8NDB2 785 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 RABGGTAQ92696 567 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 ATG4CQ96DT6 458 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 RMDN3Q96TC7 470 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 PXMP2Q9NR77 195 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 WRAP73Q9P2S5 460 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 PCDHB13Q9Y5F0 798 aa20.11■□□□□ 0.81
PDLIM7-203ENST00000359895 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 SBF1O95248 1867 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 DDX39AO00148 427 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 AKR1B10O60218 316 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 PPP1R12BO60237 982 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 NOL4O94818 638 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 EIF2AK2P19525 551 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 DSG3P32926 999 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 EIF4A3P38919 411 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 JAK3P52333 1124 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 ALCAMQ13740 583 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 NOL9Q5SY16 702 aaKnown RBP20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 ZNF720Q7Z2F6 126 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 CCDC155Q8N6L0 562 aa20.1■□□□□ 0.81
PDLIM7-203ENST00000359895 GOLGA5Q8TBA6 731 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms