RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SEZ6Q53EL9 994 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 FIZ1Q96SL8 496 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 IDI2Q9BXS1 227 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 MKNK2Q9HBH9 465 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 PICK1Q9NRD5 415 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 CTNNAL1Q9UBT7 734 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 SORBS2O94875 1100 aaKnown RBP6.32□□□□□ -1.4
CD47-201ENST00000355354 METAP2P50579 478 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD47-201ENST00000355354 NKX3-2P78367 333 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 CYP4A11Q02928 519 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 PDCLQ13371 301 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 AKNAD1Q5T1N1 836 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 SYDE2Q5VT97 1194 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 ZNF746Q6NUN9 644 aaPredicted RBP6.32□□□□□ -1.4
CD47-201ENST00000355354 PAOXQ6QHF9 649 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 TMTC1Q8IUR5 882 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 NT5C1BQ96P26 610 aa6.32□□□□□ -1.4
CD47-201ENST00000355354 ASTN1O14525 1302 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 MACROD2A1Z1Q3 448 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 E9PMD0 336 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 MYO1CO00159 1063 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 AKR1B1P15121 316 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 ZKSCAN1P17029 563 aaPredicted RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 PPATQ06203 517 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 SMC1AQ14683 1233 aaKnown RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 JAKMIP3Q5VZ66 844 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 PHF20Q9BVI0 1012 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 MAD2L2Q9UI95 211 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 TSKSQ9UJT2 592 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 STX8Q9UNK0 236 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 KIAA1549LQ6ZVL6 1849 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 FAM237AA0A1B0GTK4 181 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 TECP42680 631 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 ASTE1Q2TB18 679 aaPredicted RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 ACCSLQ4AC99 568 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 LRRC55Q6ZSA7 311 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 SGMS1Q86VZ5 419 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 AGGF1Q8N302 714 aaeCLIP6.31□□□□□ -1.4
CD47-201ENST00000355354 PRPF38AQ8NAV1 312 aaKnown RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 ZSCAN31Q96LW9 406 aaPredicted RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 COL20A1Q9P218 1284 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 SCN8AQ9UQD0 1980 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 PTPRJQ12913 1337 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 PTPN13Q12923 2485 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 A0A1B0GVG6 124 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 H3BQV1 296 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 KRT9P35527 623 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 POSTNQ15063 836 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 ATP13A4Q4VNC1 1196 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 GPR153Q6NV75 609 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 KCTD1Q719H9 257 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 CDR2LQ86X02 465 aaPredicted RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 CYP4X1Q8N118 509 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 DAW1Q8N136 415 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 ACER1Q8TDN7 264 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 ZNF274Q96GC6 653 aaPredicted RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 L3MBTL1Q9Y468 752 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 FAM86B1E9PN63 330 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 TBC1D12O60347 775 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 FAM86B2P0C5J1 330 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 IFNAR1P17181 557 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 RASA1P20936 1047 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 HOXA13P31271 388 aaPredicted RBP6.31□□□□□ -1.4
CD47-201ENST00000355354 GGCXP38435 758 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 STK38Q15208 465 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 CCDC38Q502W7 563 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 ZNF569Q5MCW4 686 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 CPNE9Q8IYJ1 553 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 CCDC33Q8N5R6 958 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 FBXO27Q8NI29 283 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 CACNG4Q9UBN1 327 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 ADAMTS1Q9UHI8 967 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 GJD2Q9UKL4 321 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 COG5Q9UP83 839 aa6.31□□□□□ -1.4
CD47-201ENST00000355354 LOC102724159A0A0B4J2E5 919 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 A0A0G2JLL6 359 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 C2orf71A6NGG8 1288 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CIAO1O76071 339 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 BMP8BP34820 402 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 RAD23BP54727 409 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 MLLT1Q03111 559 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 SPIRE1Q08AE8 756 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 MGAT5Q09328 741 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 ZNF211Q13398 564 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 PWP2Q15269 919 aaKnown RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 KIF26BQ2KJY2 2108 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 SH3D19Q5HYK7 790 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 C1orf220Q5T0J3 134 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 PRRT2Q7Z6L0 340 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 IGSF22Q8N9C0 903 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 RAD54LQ92698 747 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 DNAJC19Q96DA6 116 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 ZNF512BQ96KM6 892 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 GPRC5CQ9NQ84 441 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 CRHR2Q13324 411 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 NT5DC1Q5TFE4 455 aa6.3□□□□□ -1.4
CD47-201ENST00000355354 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
CD47-201ENST00000355354 SLC45A3Q96JT2 553 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 249.7 ms