RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 POTEEQ6S8J3 1075 aa20.89■□□□□ 0.93
SH2B3-201ENST00000341259 MXD3Q9BW11 206 aa20.89■□□□□ 0.93
SH2B3-201ENST00000341259 MRPL47Q9HD33 250 aaKnown RBP20.89■□□□□ 0.93
SH2B3-201ENST00000341259 NXF1Q9UBU9 619 aaKnown RBP20.89■□□□□ 0.93
SH2B3-201ENST00000341259 SGK1O00141 431 aa20.89■□□□□ 0.93
SH2B3-201ENST00000341259 CACNA2D3Q8IZS8 1091 aa20.89■□□□□ 0.93
SH2B3-201ENST00000341259 NME8Q8N427 588 aa20.89■□□□□ 0.93
SH2B3-201ENST00000341259 AP5M1Q9H0R1 490 aa20.89■□□□□ 0.93
SH2B3-201ENST00000341259 PHLDB2Q86SQ0 1253 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
SH2B3-201ENST00000341259 LRRC53A6NM62 1247 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 KRT1P04264 644 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 CLCN6P51797 869 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 TBC1D22BQ9NU19 505 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 DNAJC12Q9UKB3 198 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 TMEM131LA2VDJ0 1609 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 ZNF233A6NK53 670 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 ECEL1O95672 775 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 MARK3P27448 753 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 SLC12A2P55011 1212 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 DNAJC24Q6P3W2 148 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 ARHGEF2Q92974 986 aaKnown RBP20.88■□□□□ 0.93
SH2B3-201ENST00000341259 ZHX2Q9Y6X8 837 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 KIF20BQ96Q89 1820 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 A0A0G2JLW4 131 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 K7ERI5 159 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 SRGAP2CP0DJJ0 459 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 TROVE2P10155 538 aaKnown RBP eCLIP20.88■□□□□ 0.932e-6■■■■□ 21.4
SH2B3-201ENST00000341259 WRNIP1Q96S55 665 aa20.88■□□□□ 0.93
SH2B3-201ENST00000341259 CCDC151A5D8V7 595 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 FAM205CA6NFA0 338 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 MED7O43513 233 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 CD58P19256 250 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 PNMA8AQ86V59 439 aaPredicted RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 ATP6V0A4Q9HBG4 840 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 EIF3CLB5ME19 914 aaKnown RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 SLFN12LQ6IEE8 588 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 SNRNP48Q6IEG0 339 aaKnown RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 BARGINQ6ZT62 677 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 RSRC1Q96IZ7 334 aaKnown RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 PPP1R16BQ96T49 567 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 EIF3CQ99613 913 aaKnown RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 WDR64B1ANS9 1081 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 TEX33O43247 280 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 PLTPP55058 493 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 TTC19Q6DKK2 380 aaPredicted RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 BCAS4Q8TDM0 211 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 ANKRD20A3Q5VUR7 823 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 FAM193BQ96PV7 902 aaPredicted RBP20.87■□□□□ 0.93
SH2B3-201ENST00000341259 VWDEQ8N2E2 1590 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 SURF1Q15526 300 aa20.87■□□□□ 0.93
SH2B3-201ENST00000341259 BUB1BO60566 1050 aaPredicted RBP20.86■□□□□ 0.93
SH2B3-201ENST00000341259 USP11P51784 963 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 KNOP1Q1ED39 458 aaKnown RBP20.86■□□□□ 0.93
SH2B3-201ENST00000341259 HSPA6P17066 643 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 POLD4Q9HCU8 107 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 HOXC10Q9NYD6 342 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 STXBP2Q15833 593 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 SNX25Q9H3E2 840 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 SENP2Q9HC62 589 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 MTMR4Q9NYA4 1195 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 KCNH2Q12809 1159 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 KLHL14Q9P2G3 628 aa20.86■□□□□ 0.93
SH2B3-201ENST00000341259 SPATA24Q86W54 205 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 NEK9Q8TD19 979 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.85■□□□□ 0.93
SH2B3-201ENST00000341259 SPATA31A5Q5VU36 1347 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 SPATA31A7Q8IWB4 1347 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 LLGL1Q15334 1064 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 FBXO33Q7Z6M2 555 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 RSPH3Q86UC2 560 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 AP1M1Q9BXS5 423 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 HERC5Q9UII4 1024 aaKnown RBP20.85■□□□□ 0.93
SH2B3-201ENST00000341259 ATP8A1Q9Y2Q0 1164 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 NUB1Q9Y5A7 615 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 KRT76Q01546 638 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 PLCD3Q8N3E9 789 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 RILPQ96NA2 401 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 RNF146Q9NTX7 359 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 SCARA5Q6ZMJ2 495 aa20.85■□□□□ 0.93
SH2B3-201ENST00000341259 RPF1Q9H9Y2 349 aaKnown RBP20.85■□□□□ 0.93
SH2B3-201ENST00000341259 GIPC1O14908 333 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 ABL1P00519 1130 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 FCER1AP12319 257 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 SLC7A5Q01650 507 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 MKRN3Q13064 507 aaKnown RBP20.84■□□□□ 0.93
SH2B3-201ENST00000341259 PPP2R5CQ13362 524 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 ARHGAP24Q8N264 748 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 NLRP4Q96MN2 994 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 CCDC160A6NGH7 325 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 GMNNO75496 209 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 CTDNEP1O95476 244 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 YWHAGP61981 247 aaKnown RBP eCLIP20.84■□□□□ 0.93
SH2B3-201ENST00000341259 GUF1Q8N442 669 aaKnown RBP20.84■□□□□ 0.93
SH2B3-201ENST00000341259 DEPDC5O75140 1603 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 PALMO75781 387 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 FDPSP14324 419 aaKnown RBP20.84■□□□□ 0.93
SH2B3-201ENST00000341259 CHRNA5P30532 468 aa20.84■□□□□ 0.93
SH2B3-201ENST00000341259 SEMA3FQ13275 785 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms