RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NFU1Q9UMS0 254 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 A0A1W2PRG0 241 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 AFPP02771 609 aaKnown RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 PDE6BP35913 854 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 ECE1P42892 770 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 CARSP49589 748 aaKnown RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 GUCY2FP51841 1108 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 RRP1BQ14684 758 aaKnown RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 TRADDQ15628 312 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 EDRF1Q3B7T1 1238 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 CCDC174Q6PII3 467 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 LRRC31Q6UY01 552 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 KRT27Q7Z3Y8 459 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 EIF2AK1Q9BQI3 630 aaKnown RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 RABGAP1Q9Y3P9 1069 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 FOCADQ5VW36 1801 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 RBAK-RBAKDNI3L0D1 243 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 ONECUT3O60422 494 aaPredicted RBP19.09■□□□□ 0.65
COL9A1-201ENST00000320755 ZC2HC1CQ53FD0 456 aaPredicted RBP19.09■□□□□ 0.65
COL9A1-201ENST00000320755 RBM26Q5T8P6 1007 aaKnown RBP19.09■□□□□ 0.65
COL9A1-201ENST00000320755 ARFGEF1Q9Y6D6 1849 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 PITPNM2Q9BZ72 1349 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 KCNK3O14649 394 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 TRIM66O15016 1216 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 HEXIM1O94992 359 aaKnown RBP19.09■□□□□ 0.65
COL9A1-201ENST00000320755 NR3C1P04150 777 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 PON1P27169 355 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 NMT1P30419 496 aaKnown RBP19.09■□□□□ 0.65
COL9A1-201ENST00000320755 C10orf67Q8IYJ2 551 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 CSRNP1Q96S65 589 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 AIPL1Q9NZN9 384 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 FRMD3A2A2Y4 597 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 AOC3Q16853 763 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 DACT2Q5SW24 774 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 MYCT1Q8N699 235 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 FAM76AQ8TAV0 307 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 RUFY1Q96T51 708 aa19.09■□□□□ 0.65
COL9A1-201ENST00000320755 GRID2IPA4D2P6 1211 aa19.08■□□□□ 0.65
COL9A1-201ENST00000320755 OPLAHO14841 1288 aa19.08■□□□□ 0.65
COL9A1-201ENST00000320755 MARSP56192 900 aaKnown RBP19.08■□□□□ 0.65
COL9A1-201ENST00000320755 PPARDQ03181 441 aa19.08■□□□□ 0.65
COL9A1-201ENST00000320755 PLS1Q14651 629 aa19.08■□□□□ 0.65
COL9A1-201ENST00000320755 FOXR2Q6PJQ5 311 aa19.08■□□□□ 0.65
COL9A1-201ENST00000320755 CRYGNQ8WXF5 182 aa19.08■□□□□ 0.65
COL9A1-201ENST00000320755 PRMT6Q96LA8 375 aaPredicted RBP19.08■□□□□ 0.65
COL9A1-201ENST00000320755 MBOAT7Q96N66 472 aa19.08■□□□□ 0.65
COL9A1-201ENST00000320755 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.08■□□□□ 0.65
COL9A1-201ENST00000320755 TCP10L2B9ZVM9 353 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 CALUO43852 315 aaPredicted RBP19.08■□□□□ 0.64
COL9A1-201ENST00000320755 FAM153BP0C7A2 387 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 SREBF1P36956 1147 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 FAM153CQ494X1 144 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 TRMT1LQ7Z2T5 733 aaKnown RBP19.08■□□□□ 0.64
COL9A1-201ENST00000320755 IRF2BP2Q7Z5L9 587 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 RBM46Q8TBY0 533 aaKnown RBP19.08■□□□□ 0.64
COL9A1-201ENST00000320755 TAF4BQ92750 862 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 FAM153AQ9UHL3 310 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 AJAP1Q9UKB5 411 aaPredicted RBP19.08■□□□□ 0.64
COL9A1-201ENST00000320755 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
COL9A1-201ENST00000320755 TMCO5BA8MYB1 307 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 CHRNA5P30532 468 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 KCTD16Q68DU8 428 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 TATDN1Q6P1N9 297 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 CLRN2A0PK11 232 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 FAM13AO94988 1023 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 EPHB4P54760 987 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 ITIH3Q06033 890 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 Q4G0T1 1027 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 STRIP1Q5VSL9 837 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 ALKBH5Q6P6C2 394 aaKnown RBP19.07■□□□□ 0.64
COL9A1-201ENST00000320755 FRMD5Q7Z6J6 570 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 ACER1Q8TDN7 264 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 FAM20AQ96MK3 541 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 PKD2L1Q9P0L9 805 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 GCNT4Q9P109 453 aa19.07■□□□□ 0.64
COL9A1-201ENST00000320755 FOSP01100 380 aaPredicted RBP19.06■□□□□ 0.64
COL9A1-201ENST00000320755 EPB41P11171 864 aaKnown RBP19.06■□□□□ 0.64
COL9A1-201ENST00000320755 HOXA7P31268 230 aaPredicted RBP19.06■□□□□ 0.64
COL9A1-201ENST00000320755 ZNF572Q7Z3I7 529 aaPredicted RBP19.06■□□□□ 0.64
COL9A1-201ENST00000320755 DYDC2Q96IM9 177 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 IDI2Q9BXS1 227 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 TSKSQ9UJT2 592 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 TRAF3IP3Q9Y228 551 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 CEP104O60308 925 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 COG2Q14746 738 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 RPS6KA1Q15418 735 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 MEI1Q5TIA1 1274 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 MAEAQ7L5Y9 396 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 RDH13Q8NBN7 331 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 ARL8AQ96BM9 186 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 VAV3Q9UKW4 847 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 BCS1LQ9Y276 419 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 PDXKO00764 312 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 GFPT2O94808 682 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 IVLP07476 585 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 RINT1Q6NUQ1 792 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 IFT20Q8IY31 132 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 SRCAPQ6ZRS2 3230 aa19.06■□□□□ 0.64
COL9A1-201ENST00000320755 ASTN1O14525 1302 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms