RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 KCNB1Q14721 858 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 TMED2Q15363 201 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 TRIM68Q6AZZ1 485 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 ARHGAP24Q8N264 748 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 YWHAGP61981 247 aaKnown RBP eCLIP18.63■□□□□ 0.57
GABRB3-202ENST00000311550 CUL1Q13616 776 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 SNCBQ16143 134 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 NYAP1Q6ZVC0 841 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 TDRD3Q9H7E2 651 aaKnown RBP18.63■□□□□ 0.57
GABRB3-202ENST00000311550 CTIFO43310 598 aaKnown RBP18.63■□□□□ 0.57
GABRB3-202ENST00000311550 E2F5Q15329 346 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 FAM133BQ5BKY9 247 aaKnown RBP18.63■□□□□ 0.57
GABRB3-202ENST00000311550 SEPT14Q6ZU15 432 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 CLEC10AQ8IUN9 316 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 DDX47Q9H0S4 455 aaKnown RBP18.63■□□□□ 0.57
GABRB3-202ENST00000311550 ANAPC4Q9UJX5 808 aa18.63■□□□□ 0.57
GABRB3-202ENST00000311550 TRPC5Q9UL62 973 aaPredicted RBP18.63■□□□□ 0.57
GABRB3-202ENST00000311550 NRBP2Q9NSY0 501 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 H7C0C1 242 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 RASGRF2O14827 1237 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 HOXA7P31268 230 aaPredicted RBP18.62■□□□□ 0.57
GABRB3-202ENST00000311550 ATP5OP48047 213 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 GCLMP48507 274 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 ZNF710Q8N1W2 664 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 DCAF4Q8WV16 495 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 CSADQ9Y600 493 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 ACSL3O95573 720 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 SESN3P58005 492 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 STK4Q13043 487 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 ZNF211Q13398 564 aaPredicted RBP18.62■□□□□ 0.57
GABRB3-202ENST00000311550 KNOP1Q1ED39 458 aaKnown RBP18.62■□□□□ 0.57
GABRB3-202ENST00000311550 GLE1Q53GS7 698 aaKnown RBP18.62■□□□□ 0.57
GABRB3-202ENST00000311550 GADL1Q6ZQY3 521 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 HMGB1P1B2RPK0 211 aaPredicted RBP18.62■□□□□ 0.57
GABRB3-202ENST00000311550 HIP1RO75146 1068 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 RASGRP2Q7LDG7 609 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 MICAL1Q8TDZ2 1067 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 DYDC2Q96IM9 177 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.62■□□□□ 0.57
GABRB3-202ENST00000311550 NPR1P16066 1061 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 BRDTQ58F21 947 aaPredicted RBP18.62■□□□□ 0.57
GABRB3-202ENST00000311550 SPATA24Q86W54 205 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 GDAP1Q8TB36 358 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 MAD1L1Q9Y6D9 718 aa18.62■□□□□ 0.57
GABRB3-202ENST00000311550 NPHP3-ACAD11A0A0J9YXS1 232 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 MMP10P09238 476 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 CD58P19256 250 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 SMC1BQ8NDV3 1235 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 RAB3IL1Q8TBN0 382 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 FRMPD1Q5SYB0 1578 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 CCDC188H7C350 402 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 KRT1P04264 644 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 GYPCP04921 128 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 IL9RQ01113 521 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 RFX6Q8HWS3 928 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 HSPA6P17066 643 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 PTPAQ15257 358 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 SLC17A8Q8NDX2 589 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 RAB3IPQ96QF0 476 aaPredicted RBP18.61■□□□□ 0.57
GABRB3-202ENST00000311550 PPP2R5CQ13362 524 aa18.61■□□□□ 0.57
GABRB3-202ENST00000311550 CAMTA2O94983 1202 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 TFAMQ00059 246 aaKnown RBP18.6■□□□□ 0.57
GABRB3-202ENST00000311550 CCDC38Q502W7 563 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 SPATA4Q8NEY3 305 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 TRIM11Q96F44 468 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 TMEM60Q9H2L4 133 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 INO80B-WBP1J3KQ70 363 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 PDXDC1Q6P996 788 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 ATP2A3Q93084 1043 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 LRRC1Q9BTT6 524 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 INO80BQ9C086 356 aaPredicted RBP18.6■□□□□ 0.57
GABRB3-202ENST00000311550 SYNJ2BP-COX16A0A087WUM0 186 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 ZBTB33Q86T24 672 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 COX16Q9P0S2 106 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 NXF1Q9UBU9 619 aaKnown RBP18.6■□□□□ 0.57
GABRB3-202ENST00000311550 TFR2Q9UP52 801 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 TXNDC9O14530 226 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 OSTNP61366 133 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 PSMD6Q15008 389 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 ZNF746Q6NUN9 644 aaPredicted RBP18.6■□□□□ 0.57
GABRB3-202ENST00000311550 SEPT10Q9P0V9 454 aa18.6■□□□□ 0.57
GABRB3-202ENST00000311550 DEPDC5O75140 1603 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 MRPS9P82933 396 aaKnown RBP18.59■□□□□ 0.57
GABRB3-202ENST00000311550 EEPD1Q7L9B9 569 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 RHOT2Q8IXI1 618 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 SLMAPQ14BN4 828 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 SEPT12Q8IYM1 358 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 ZNF341Q9BYN7 854 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 F5H6K3 240 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 LMNB2Q03252 620 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 KLRC3Q07444 240 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 PPP2R5AQ15172 486 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 COG1Q8WTW3 980 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 HESX1Q9UBX0 185 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 FRMD3A2A2Y4 597 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 RPSAP08865 295 aaKnown RBP18.59■□□□□ 0.57
GABRB3-202ENST00000311550 KLK7P49862 253 aa18.59■□□□□ 0.57
GABRB3-202ENST00000311550 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
GABRB3-202ENST00000311550 SESTD1Q86VW0 696 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms