RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 NSUN4Q96CB9 384 aaKnown RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 L3MBTL3Q96JM7 780 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-201ENST00000262887 SELENOSQ9BQE4 189 aa16.32■□□□□ 0.2
XRCC1-201ENST00000262887 COL5A2P05997 1499 aaPredicted RBP16.31■□□□□ 0.2
XRCC1-201ENST00000262887 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 PTK2Q05397 1052 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 ZNF268Q14587 947 aaPredicted RBP16.31■□□□□ 0.2
XRCC1-201ENST00000262887 ZCWPW2Q504Y3 356 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 C10orf76Q5T2E6 689 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 LRRC57Q8N9N7 239 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 SEC14L1Q92503 715 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
XRCC1-201ENST00000262887 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 ADAMTS2O95450 1211 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 MECOMQ03112 1051 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 SPDYCQ5MJ68 293 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 PEX26Q7Z412 305 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 LRRC34Q8IZ02 419 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 ATXN2LQ8WWM7 1075 aaKnown RBP16.31■□□□□ 0.2
XRCC1-201ENST00000262887 RAD54LQ92698 747 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 FMO2Q99518 471 aa16.31■□□□□ 0.2
XRCC1-201ENST00000262887 PPFIA2O75334 1257 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 GOLGA8HP0CJ92 632 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 GNA11P29992 359 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 IL6STP40189 918 aaPredicted RBP16.3■□□□□ 0.2
XRCC1-201ENST00000262887 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 FOXR2Q6PJQ5 311 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 ELAC2Q9BQ52 826 aaKnown RBP16.3■□□□□ 0.2
XRCC1-201ENST00000262887 TRIM31Q9BZY9 425 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 AFF2P51816 1311 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 CALCRLQ16602 461 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 TMEM266Q2M3C6 531 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 CDCA2Q69YH5 1023 aaPredicted RBP16.3■□□□□ 0.2
XRCC1-201ENST00000262887 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 KIF9Q9HAQ2 790 aa16.3■□□□□ 0.2
XRCC1-201ENST00000262887 USP17L3A6NCW0 530 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 USP17L4A6NCW7 530 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 ZBTB48P10074 688 aaPredicted RBP16.29■□□□□ 0.2
XRCC1-201ENST00000262887 ALADP13716 330 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
XRCC1-201ENST00000262887 MMP13P45452 471 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 RWDD2BP57060 319 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 USP17L1Q7RTZ2 530 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 ZNF571Q7Z3V5 609 aaPredicted RBP16.29■□□□□ 0.2
XRCC1-201ENST00000262887 TRIM59Q8IWR1 403 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 SNX29Q8TEQ0 813 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 ZNF570Q96NI8 536 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 LRRC27Q9C0I9 530 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 GANQ9H2C0 597 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 LAMB1P07942 1786 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 POTEMA6NI47 508 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 GNA14O95837 355 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 USP17L8P0C7I0 530 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 NQO1P15559 274 aaKnown RBP16.29■□□□□ 0.2
XRCC1-201ENST00000262887 COASYQ13057 564 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 SOGA3Q5TF21 947 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 CAPRIN2Q6IMN6 1127 aaKnown RBP16.29■□□□□ 0.2
XRCC1-201ENST00000262887 RASGEF1CQ8N431 466 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 TPCN2Q8NHX9 752 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 CEP63Q96MT8 703 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 PLCD4Q9BRC7 762 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 TXLNGYQ9BZA5 131 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 KCNMB3Q9NPA1 279 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 SLAIN2Q9P270 581 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 NAGPAQ9UK23 515 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
XRCC1-201ENST00000262887 DIAPH2O60879 1101 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 ALKBH5Q6P6C2 394 aaKnown RBP16.28■□□□□ 0.2
XRCC1-201ENST00000262887 SAAL1Q96ER3 474 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 RAB34Q9BZG1 259 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 GOPCQ9HD26 462 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 XIRP1Q702N8 1843 aaKnown RBP16.28■□□□□ 0.2
XRCC1-201ENST00000262887 KLRF2D3W0D1 207 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 SHBGP04278 402 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 VIMP08670 466 aaKnown RBP16.28■□□□□ 0.2
XRCC1-201ENST00000262887 UBE4AQ14139 1066 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 FAM26FQ5R3K3 315 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 KCNK18Q7Z418 384 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 NELFCDQ8IXH7 590 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 MICAL1Q8TDZ2 1067 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 PGM2Q96G03 612 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 TRIM51Q9BSJ1 452 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 ADAM7Q9H2U9 754 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 MKNK2Q9HBH9 465 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 ABCF3Q9NUQ8 709 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 INTS9Q9NV88 658 aaKnown RBP16.28■□□□□ 0.2
XRCC1-201ENST00000262887 TBC1D7Q9P0N9 293 aa16.28■□□□□ 0.2
XRCC1-201ENST00000262887 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
XRCC1-201ENST00000262887 PALM3A6NDB9 673 aaPredicted RBP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 SMNDC1O75940 238 aaKnown RBP eCLIP16.27■□□□□ 0.2
XRCC1-201ENST00000262887 TSPY3P0CV98 308 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 TSPY8P0CW00 308 aa16.27■□□□□ 0.2
XRCC1-201ENST00000262887 PEX19P40855 299 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms