RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 LIMA1Q9UHB6 759 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 DCAF8L1A6NGE4 600 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 LYPLA2O95372 231 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SP2Q02086 613 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 WDR78Q5VTH9 848 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 POLD4Q9HCU8 107 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 KCND2Q9NZV8 630 aa21.82■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SFR1Q86XK3 245 aa21.81■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SMAP1Q8IYB5 467 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ANKRD13CQ8N6S4 541 aa21.81■■□□□ 1.08
TNFRSF1A-201ENST00000162749 GPRC5AQ8NFJ5 357 aa21.81■■□□□ 1.08
TNFRSF1A-201ENST00000162749 PTPN18Q99952 460 aa21.81■■□□□ 1.08
TNFRSF1A-201ENST00000162749 EFCC1Q9HA90 598 aa21.81■■□□□ 1.08
TNFRSF1A-201ENST00000162749 PCDHA10Q9Y5I2 948 aa21.81■■□□□ 1.08
TNFRSF1A-201ENST00000162749 TBCAO75347 108 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SEPT14Q6ZU15 432 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 C4orf19Q8IY42 314 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SCFD1Q8WVM8 642 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SLC9A2Q9UBY0 812 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 TELO2Q9Y4R8 837 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 DOCK3Q8IZD9 2030 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 PSMC5P62195 406 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 LRRC63Q05C16 580 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 GLIPR1L2Q4G1C9 344 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 NOC3LQ8WTT2 800 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 DBR1Q9UK59 544 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 COL4A3BPQ9Y5P4 624 aa21.8■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ARHGEF35A5YM69 484 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 DYNC1I1O14576 645 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 TEX33O43247 280 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 EEF1GP26641 437 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 YWHABP31946 246 aaKnown RBP21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 RARRES1P49788 294 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CASP5P51878 434 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CCZ1BP86790 482 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CCZ1P86791 482 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ZCWPW2Q504Y3 356 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 FOXR2Q6PJQ5 311 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CREBRFQ8IUR6 639 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ANKRD20A12PQ8NF67 263 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 OLFML3Q9NRN5 406 aa21.79■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SFI1A8K8P3 1242 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 GCLCP48506 637 aaPredicted RBP21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 GSDMDP57764 484 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CCNA1P78396 465 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SP4Q02446 784 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SORBS3O60504 671 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 GUCY2CP25092 1073 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ZNF131P52739 623 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 COPB1P53618 953 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ACTR2P61160 394 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 FILIP1LQ4L180 1135 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 PADI6Q6TGC4 694 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 CYFIP1Q7L576 1253 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 PARVGQ9HBI0 331 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 TAB2Q9NYJ8 693 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 MORF4L1Q9UBU8 362 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 ODF2LQ9ULJ1 636 aa21.78■■□□□ 1.08
TNFRSF1A-201ENST00000162749 TMEM150BA6NC51 233 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 B4DLN1 442 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 FAM13AO94988 1023 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 SKILP12757 684 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 GAP43P17677 238 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 EPM2AIP1Q7L775 607 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 EEPD1Q7L9B9 569 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 VPS16Q9H269 839 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 KCTD10Q9H3F6 313 aa21.77■■□□□ 1.08
TNFRSF1A-201ENST00000162749 N4BP3O15049 544 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 KIF20AO95235 890 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 UBA1P22314 1058 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 UTP14CQ5TAP6 766 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SPECC1LQ69YQ0 1117 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ABHD15Q6UXT9 468 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 TRMT1LQ7Z2T5 733 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 CCDC60Q8IWA6 550 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 NELFCDQ8IXH7 590 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PARK7Q99497 189 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MPHOSPH6Q99547 160 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SH2D3AQ9BRG2 576 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MRPL44Q9H9J2 332 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 GABBR1Q9UBS5 961 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ZNF862O60290 1169 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PSAPP07602 524 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 GTF2F1P35269 517 aaKnown RBP eCLIP21.76■■□□□ 1.071e-6■■■■□ 22.9
TNFRSF1A-201ENST00000162749 PBX1P40424 430 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 RBM10P98175 930 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ARMCX5Q6P1M9 558 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 LRRC55Q6ZSA7 311 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 RASAL3Q86YV0 1011 aa21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 CNOT6LQ96LI5 555 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MAGEC2Q9UBF1 373 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MAPK7Q13164 816 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ANO5Q75V66 913 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SAPCD2Q86UD0 394 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FAM114A1Q8IWE2 563 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 DAW1Q8N136 415 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MYCT1Q8N699 235 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ATP6V0A1Q93050 837 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 C16orf45Q96MC5 204 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FIZ1Q96SL8 496 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms