RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 TOP3AQ13472 1001 aaPredicted RBP4.88□□□□□ -1.63
VPS8-228ENST00000628962 SV2CQ496J9 727 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 OTOP3Q7RTS5 596 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 MRGPRGQ86SM5 289 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 SEC16BQ96JE7 1060 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 OR14A2Q96R54 314 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 CRAMP1Q96RY5 1269 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 ZNF703Q9H7S9 590 aaPredicted RBP4.88□□□□□ -1.63
VPS8-228ENST00000628962 TELO2Q9Y4R8 837 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 CDC14BO60729 498 aa4.87□□□□□ -1.63
VPS8-228ENST00000628962 CUTAO60888 179 aa4.87□□□□□ -1.63
VPS8-228ENST00000628962 ZMAT1Q5H9K5 638 aa4.87□□□□□ -1.63
VPS8-228ENST00000628962 ZNF627Q7L945 461 aa4.87□□□□□ -1.63
VPS8-228ENST00000628962 ZNF808Q8N4W9 903 aaPredicted RBP4.87□□□□□ -1.63
VPS8-228ENST00000628962 UHMK1Q8TAS1 419 aaKnown RBP4.87□□□□□ -1.63
VPS8-228ENST00000628962 TACO1Q9BSH4 297 aaKnown RBP4.87□□□□□ -1.63
VPS8-228ENST00000628962 PLA2G12BQ9BX93 195 aa4.87□□□□□ -1.63
VPS8-228ENST00000628962 LRP2BPQ9P2M1 347 aa4.87□□□□□ -1.63
VPS8-228ENST00000628962 PPARGC1AQ9UBK2 798 aaKnown RBP4.87□□□□□ -1.63
VPS8-228ENST00000628962 DMRT1Q9Y5R6 373 aa4.87□□□□□ -1.63
VPS8-228ENST00000628962 MSCO60682 206 aa4.86□□□□□ -1.63
VPS8-228ENST00000628962 HMGB1P09429 215 aaKnown RBP4.86□□□□□ -1.63
VPS8-228ENST00000628962 MAKP20794 623 aa4.86□□□□□ -1.63
VPS8-228ENST00000628962 NOLC1Q14978 699 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS8-228ENST00000628962 C6orf15Q6UXA7 325 aaPredicted RBP4.86□□□□□ -1.63
VPS8-228ENST00000628962 ZNF483Q8TF39 744 aaPredicted RBP4.86□□□□□ -1.63
VPS8-228ENST00000628962 VOPP1Q96AW1 172 aa4.86□□□□□ -1.63
VPS8-228ENST00000628962 GPR27Q9NS67 375 aa4.86□□□□□ -1.63
VPS8-228ENST00000628962 STRIP2Q9ULQ0 834 aa4.86□□□□□ -1.63
VPS8-228ENST00000628962 SUSD5O60279 629 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 KRT4P19013 534 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 EPHA5P54756 1037 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 ZC3H6P61129 1189 aaKnown RBP4.85□□□□□ -1.63
VPS8-228ENST00000628962 FOXL1Q12952 345 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 NFYCQ13952 458 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 TBR1Q16650 682 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 HABP4Q5JVS0 413 aaKnown RBP4.85□□□□□ -1.63
VPS8-228ENST00000628962 DPY19L2P1Q6NXN4 242 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 SREK1Q8WXA9 508 aaKnown RBP4.85□□□□□ -1.63
VPS8-228ENST00000628962 SCYL1Q96KG9 808 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 C8orf37Q96NL8 207 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 MSL2Q9HCI7 577 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 AURKAIP1Q9NWT8 199 aaPredicted RBP4.85□□□□□ -1.63
VPS8-228ENST00000628962 CEP72Q9P209 647 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.85□□□□□ -1.63
VPS8-228ENST00000628962 NR2E1Q9Y466 385 aa4.85□□□□□ -1.63
VPS8-228ENST00000628962 ESYT3A0FGR9 886 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 ACOT7O00154 380 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 DNAJA1P31689 397 aaKnown RBP4.84□□□□□ -1.63
VPS8-228ENST00000628962 HIBADHP31937 336 aaKnown RBP4.84□□□□□ -1.63
VPS8-228ENST00000628962 RPS19P39019 145 aaKnown RBP4.84□□□□□ -1.63
VPS8-228ENST00000628962 RRADP55042 308 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 MAP4K2Q12851 820 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 Q6ZPA2 131 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.84□□□□□ -1.63
VPS8-228ENST00000628962 FAM178BQ8IXR5 827 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 CFHR4Q92496 578 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 PRRX2Q99811 253 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 TLR9Q9NR96 1032 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 NUB1Q9Y5A7 615 aa4.84□□□□□ -1.63
VPS8-228ENST00000628962 B2RBV5 119 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 NKRFO15226 690 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS8-228ENST00000628962 ARHGAP6O43182 974 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 COL6A2P12110 1019 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 ETV4P43268 484 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 COL10A1Q03692 680 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 SCUBE1Q8IWY4 988 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 ULK2Q8IYT8 1036 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 MICAL1Q8TDZ2 1067 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 ANAPC16Q96DE5 110 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 DRC1Q96MC2 740 aa4.83□□□□□ -1.64
VPS8-228ENST00000628962 HSP90B1P14625 803 aaKnown RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 ERCC5P28715 1186 aaPredicted RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 MSX2P35548 267 aaPredicted RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 GRIA2P42262 883 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 SPIRE1Q08AE8 756 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 SF3A1Q15459 793 aaKnown RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 MRM1Q6IN84 353 aaKnown RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 RSPO2Q6UXX9 243 aaPredicted RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 DPP8Q6V1X1 898 aaPredicted RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 KCTD1Q719H9 257 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 NT5DC4Q86YG4 428 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 KCTD13Q8WZ19 329 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 CLIP3Q96DZ5 547 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 C12orf65Q9H3J6 166 aaKnown RBP4.82□□□□□ -1.64
VPS8-228ENST00000628962 SLC39A2Q9NP94 309 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 PLA2G3Q9NZ20 509 aa4.82□□□□□ -1.64
VPS8-228ENST00000628962 RAMP2O60895 175 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 GNAT1P11488 350 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 GRK2P25098 689 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 GRK3P35626 688 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 HDLBPQ00341 1268 aaKnown RBP4.81□□□□□ -1.64
VPS8-228ENST00000628962 LRCH2Q5VUJ6 765 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 TMPRSS6Q8IU80 811 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 PHF20Q9BVI0 1012 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 ZDHHC5Q9C0B5 715 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 PPP1R1BQ9UD71 204 aaPredicted RBP4.81□□□□□ -1.64
VPS8-228ENST00000628962 PUF60Q9UHX1 559 aaKnown RBP4.81□□□□□ -1.64
VPS8-228ENST00000628962 DSEQ9UL01 958 aa4.81□□□□□ -1.64
VPS8-228ENST00000628962 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms