RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 PPP2R3CQ969Q6 453 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 ITPKCQ96DU7 683 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 NEUROD6Q96NK8 337 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 NEK1Q96PY6 1258 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 TLE6Q9H808 572 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 RC3H2Q9HBD1 1191 aaKnown RBP8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 NR2E1Q9Y466 385 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 ADGRA3Q8IWK6 1321 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 KRBA1A5PL33 1030 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 USP17L12C9JPN9 530 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 USP17L21D6R901 530 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 ATP2A1O14983 1001 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 ANKRD54Q6NXT1 300 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 LLGL2Q6P1M3 1020 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 KLHL23Q8NBE8 558 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 FEZF2Q8TBJ5 459 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 FAM174AQ8TBP5 190 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 KAT2BQ92831 832 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 SH2D4AQ9H788 454 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 GPR108Q9NPR9 543 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 PIH1D3Q9NQM4 214 aaKnown RBP8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 DLGAP2Q9P1A6 1054 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 HDAC6Q9UBN7 1215 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 FBXL21Q9UKT6 434 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 SMG5Q9UPR3 1016 aaKnown RBP8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 COG6Q9Y2V7 657 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 FANCIQ9NVI1 1328 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 FANCMQ8IYD8 2048 aa8.3□□□□□ -1.08
SCAMP1-206ENST00000618166 MYO10Q9HD67 2058 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 A6NJR5 290 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 NARSO43776 548 aaKnown RBP8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 CYP2E1P05181 493 aaPredicted RBP8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 GLULP15104 373 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 SPINK2P20155 84 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 CYP7A1P22680 504 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 EXOSC9Q06265 439 aaKnown RBP8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 CCDC6Q16204 474 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 C1orf210Q8IVY1 113 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 CHST13Q8NET6 341 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 NETO1Q8TDF5 533 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 VTA1Q9NP79 307 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 FBXO40Q9UH90 709 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 GTF2IRD1Q9UHL9 959 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 PCDHGC3Q9UN70 934 aa8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 MRPL42Q9Y6G3 142 aaKnown RBP8.29□□□□□ -1.08
SCAMP1-206ENST00000618166 ZBED4O75132 1171 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 LRRN2O75325 713 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 MMP3P08254 477 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 FDX1P10109 184 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 BMP2P12643 396 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 RBM25P49756 843 aaKnown RBP8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 PTK7Q13308 1070 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 KCNC3Q14003 757 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 BTG3Q14201 252 aaPredicted RBP8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 DUSP6Q16828 381 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 SESTD1Q86VW0 696 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 GPIHBP1Q8IV16 184 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 SVOPQ8N4V2 548 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 ADAM32Q8TC27 787 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 NANOS1Q8WY41 292 aaKnown RBP8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 BBC3Q96PG8 261 aaPredicted RBP8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 ACAD9Q9H845 621 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 SLC38A10Q9HBR0 1119 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 RWDD3Q9Y3V2 267 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 NAV1Q8NEY1 1877 aa8.28□□□□□ -1.08
SCAMP1-206ENST00000618166 FREM2Q5SZK8 3169 aa8.27□□□□□ -1.08
SCAMP1-206ENST00000618166 RSPH10B2B2RC85 870 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 RSPH10BP0C881 870 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 THPOP40225 353 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 TBC1D8BQ0IIM8 1120 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 NR5A1Q13285 461 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 MUM1L1Q5H9M0 696 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 GORABQ5T7V8 394 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 PRPF38AQ8NAV1 312 aaKnown RBP8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 MICAL1Q8TDZ2 1067 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 MORC4Q8TE76 937 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 P2RX5Q93086 422 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 HNRNPABQ99729 332 aaKnown RBP8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 ALG1Q9BT22 464 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 PLVAPQ9BX97 442 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 GOPCQ9HD26 462 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 RNF146Q9NTX7 359 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 LCTP09848 1927 aa8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 MYO5AQ9Y4I1 1855 aaKnown RBP8.27□□□□□ -1.09
SCAMP1-206ENST00000618166 EMSYQ7Z589 1322 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 ARIH2O95376 493 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 NR3C2P08235 984 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 CTSHP09668 335 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 ERVFC1P60507 584 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 LPAL2Q16609 132 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 ZDHHC14Q8IZN3 488 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 MEIOBQ8N635 442 aa8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 TDRD5Q8NAT2 981 aaKnown RBP8.26□□□□□ -1.09
SCAMP1-206ENST00000618166 SEPT8Q92599 483 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms