RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 USP11P51784 963 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 MARSP56192 900 aaKnown RBP12.96□□□□□ -0.33
C11orf54-215ENST00000617482 DDR1Q08345 913 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 TRADDQ15628 312 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 IFT20Q8IY31 132 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 RUBCNQ92622 972 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 P2RX7Q99572 595 aaKnown RBP12.96□□□□□ -0.33
C11orf54-215ENST00000617482 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 DHX36Q9H2U1 1008 aaKnown RBP12.96□□□□□ -0.33
C11orf54-215ENST00000617482 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 AIPL1Q9NZN9 384 aa12.96□□□□□ -0.33
C11orf54-215ENST00000617482 GRID2IPA4D2P6 1211 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 KRT14P02533 472 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.34
C11orf54-215ENST00000617482 GUCY2FP51841 1108 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 PTK2Q05397 1052 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.34
C11orf54-215ENST00000617482 MEI1Q5TIA1 1274 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 APOBEC3HQ6NTF7 200 aaKnown RBP12.96□□□□□ -0.34
C11orf54-215ENST00000617482 SH3GL2Q99962 352 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 CAPS2Q9BXY5 557 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 GANQ9H2C0 597 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 BCAS3Q9H6U6 928 aa12.96□□□□□ -0.34
C11orf54-215ENST00000617482 GOLGA8KD6RF30 607 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 MEIS2O14770 477 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 OPA1O60313 960 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-215ENST00000617482 TAL1P17542 331 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-215ENST00000617482 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 GIT2Q14161 759 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 KCTD19Q17RG1 926 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-215ENST00000617482 USH1GQ495M9 461 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 GLE1Q53GS7 698 aaKnown RBP12.95□□□□□ -0.34
C11orf54-215ENST00000617482 TTMPQ5BVD1 217 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 ALS2CLQ60I27 953 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 KCTD16Q68DU8 428 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 SFR1Q86XK3 245 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 CAVIN3Q969G5 261 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 ZIM3Q96PE6 472 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 PCDHGC5Q9Y5F6 944 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
C11orf54-215ENST00000617482 MYBP10242 640 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 GNGT1P63211 74 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 ARHGAP4P98171 946 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 CYP4A11Q02928 519 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 DCAF17Q5H9S7 520 aaPredicted RBP12.94□□□□□ -0.34
C11orf54-215ENST00000617482 SLFN13Q68D06 897 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 ZNF571Q7Z3V5 609 aaPredicted RBP12.94□□□□□ -0.34
C11orf54-215ENST00000617482 IRF2BP2Q7Z5L9 587 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 KLHL7Q8IXQ5 586 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 SH2D3CQ8N5H7 860 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 CCDC43Q96MW1 224 aaKnown RBP12.94□□□□□ -0.34
C11orf54-215ENST00000617482 SPAG5Q96R06 1193 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 NAP1L4Q99733 375 aaKnown RBP12.94□□□□□ -0.34
C11orf54-215ENST00000617482 REEP2Q9BRK0 252 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 GDF3Q9NR23 364 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 ARMCX3Q9UH62 379 aaPredicted RBP12.94□□□□□ -0.34
C11orf54-215ENST00000617482 DNM3Q9UQ16 869 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 LY75O60449 1722 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 MYH7BA7E2Y1 1941 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 CYP3A7-CYP3A51PA0A087WV96 503 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 FRMD3A2A2Y4 597 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 G3V3G9 751 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 KCNK3O14649 394 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 UCHL3P15374 230 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 CYP3A7P24462 503 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 HOXD13P35453 343 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 NOP2P46087 812 aaKnown RBP12.94□□□□□ -0.34
C11orf54-215ENST00000617482 CCT5P48643 541 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
C11orf54-215ENST00000617482 EDRF1Q3B7T1 1238 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 TCERG1LQ5VWI1 586 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 SLFN12Q8IYM2 578 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 TEKT1Q969V4 418 aa12.94□□□□□ -0.34
C11orf54-215ENST00000617482 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 TNFRSF8P28908 595 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 SPIRE1Q08AE8 756 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 IKQ13123 557 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-215ENST00000617482 EXOC3L4Q17RC7 722 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 PROCA1Q8NCQ7 364 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-215ENST00000617482 ETNPPLQ8TBG4 499 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 BCAS4Q8TDM0 211 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 INPP4AQ96PE3 977 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-215ENST00000617482 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 SFI1A8K8P3 1242 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 VGLL3A8MV65 326 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 FAM86B1E9PN63 330 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
C11orf54-215ENST00000617482 AKAP3O75969 853 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 AFPP02771 609 aaKnown RBP12.93□□□□□ -0.34
C11orf54-215ENST00000617482 FAM86B2P0C5J1 330 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms