RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PLCB3Q01970 1234 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 GNL2Q13823 731 aaKnown RBP5.65□□□□□ -1.5
SYCP1-209ENST00000613524 GPATCH4Q5T3I0 446 aaKnown RBP5.65□□□□□ -1.5
SYCP1-209ENST00000613524 TRIM50Q86XT4 487 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 RIOX2Q8IUF8 465 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 CYP2W1Q8TAV3 490 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 SOCS4Q8WXH5 440 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 MKL1Q969V6 931 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 AMNQ9BXJ7 453 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 MROH8Q9H579 483 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 CYP39A1Q9NYL5 469 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 TPCN1Q9ULQ1 816 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 COL4A3BPQ9Y5P4 624 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 FOCADQ5VW36 1801 aa5.65□□□□□ -1.5
SYCP1-209ENST00000613524 K7ELQ4 463 aaPredicted RBP5.65□□□□□ -1.51
SYCP1-209ENST00000613524 ICAM1P05362 532 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 ZNF286BP0CG31 522 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 CALM1P0DP23 149 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 CALM2P0DP24 149 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 CALM3P0DP25 149 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 RARBP10826 455 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 PSMA5P28066 241 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 PTPRNQ16849 979 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 ASPRV1Q53RT3 343 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 ZNF746Q6NUN9 644 aaPredicted RBP5.65□□□□□ -1.51
SYCP1-209ENST00000613524 RUFY3Q7L099 469 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 MB21D1Q8N884 522 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 TTC14Q96N46 770 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 SLC5A4Q9NY91 659 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 MORF4L1Q9UBU8 362 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 RABGEF1Q9UJ41 708 aa5.65□□□□□ -1.51
SYCP1-209ENST00000613524 SLC15A5A6NIM6 579 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 ZBTB5O15062 677 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 LZTS3O60299 673 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SLC25A27O95847 323 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 TXNP10599 105 aaKnown RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 NLRP5P59047 1200 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 ACVR2BQ13705 512 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 GRB14Q14449 540 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 KRT32Q14532 448 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 WWC2Q6AWC2 1192 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 REPS2Q8NFH8 660 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 GPR152Q8TDT2 470 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 CUL5Q93034 780 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 MARVELD3Q96A59 401 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 WDR11Q9BZH6 1224 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 PSTPIP2Q9H939 334 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SAMM50Q9Y512 469 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 ASTN1O14525 1302 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 MUC3AQ02505 3323 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 COL2A1P02458 1487 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SMCO2A6NFE2 343 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SPDYE3A6NKU9 549 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 JUNDP17535 347 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 TNFAIP2Q03169 654 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 TOB2Q14106 344 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 GRM4Q14833 912 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 PKN2Q16513 984 aaKnown RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 C16orf46Q6P387 395 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 PDXDC2PQ6P474 469 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 CLEC17AQ6ZS10 378 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 HNRNPLLQ8WVV9 542 aaKnown RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 TMEM87BQ96K49 555 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 TCEAL9Q9UHQ7 104 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 REV3LO60673 3130 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 RPTORQ8N122 1335 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 TRIOO75962 3097 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 GCOM1H8Y6P7 765 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 ARIH2O95376 493 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SGPL1O95470 568 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SNAI1O95863 264 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 POLR2MP0CAP2 368 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 PDIA3P30101 505 aaKnown RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 CEBPZQ03701 1054 aaKnown RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 MAP7D1Q3KQU3 841 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 TKFCQ3LXA3 575 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 FAM117BQ6P1L5 589 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 EXOC8Q8IYI6 725 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SYTL5Q8TDW5 730 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 KCNB2Q92953 911 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 SRPK1Q96SB4 655 aaKnown RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 ST7Q9NRC1 585 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 GINM1Q9NU53 330 aa5.64□□□□□ -1.51
SYCP1-209ENST00000613524 ORC3Q9UBD5 711 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-209ENST00000613524 FAM205CA6NFA0 338 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 KBTBD13C9JR72 458 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 H0YGN5 161 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 ALDH5A1P51649 535 aaPredicted RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 CCL23P55773 120 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SCRN1Q12765 414 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 KCNA10Q16322 511 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 ME3Q16798 604 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 TMTC3Q6ZXV5 915 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 CYFIP1Q7L576 1253 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 NOP9Q86U38 636 aaKnown RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 TLK2Q86UE8 772 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 TRIM22Q8IYM9 498 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 FAM184AQ8NB25 1140 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 OR6J1Q8NGC5 347 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms