RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NTRK3Q16288 839 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 DCUN1D2Q6PH85 259 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 ARMC2Q8NEN0 867 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 VTI1AQ96AJ9 217 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 ZNF512BQ96KM6 892 aaPredicted RBP15.86■□□□□ 0.13
VPS36-207ENST00000611132 CD248Q9HCU0 757 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 TXNDC16Q9P2K2 825 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 PHF20L1A8MW92 1017 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 RIMBP2O15034 1052 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 RNASELQ05823 741 aaKnown RBP15.85■□□□□ 0.13
VPS36-207ENST00000611132 SNX1Q13596 522 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 CFAP157Q5JU67 520 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 CYP4F22Q6NT55 531 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 OR2W6PQ8NHA6 318 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 ANAPC5Q9UJX4 755 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 PCDHA1Q9Y5I3 950 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 CYP2D6P10635 497 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 TMOD1P28289 359 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 PHBP35232 272 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 SH3BGRP55822 239 aaPredicted RBP15.85■□□□□ 0.13
VPS36-207ENST00000611132 RHOT2Q8IXI1 618 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 SCYL3Q8IZE3 742 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 RAD54LQ92698 747 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 EHD2Q9NZN4 543 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 GGA1Q9UJY5 639 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 RAD51CO43502 376 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 GAS7O60861 476 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 BTDP43251 543 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 LGSNQ5TDP6 509 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
VPS36-207ENST00000611132 CFAP61Q8NHU2 1237 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 HPS3Q969F9 1004 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 CARD10Q9BWT7 1032 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 SCOCQ9UIL1 159 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 SKIP12755 728 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 COASYQ13057 564 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 PLCB4Q15147 1175 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 AGBL2Q5U5Z8 902 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 FBXO41Q8TF61 875 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 RILPQ96NA2 401 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 PITPNM3Q9BZ71 974 aa15.85■□□□□ 0.13
VPS36-207ENST00000611132 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 MIF4GDA9UHW6 222 aaKnown RBP15.84■□□□□ 0.13
VPS36-207ENST00000611132 BAG2O95816 211 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 CFBP00751 764 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 GAP43P17677 238 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 TMED2Q15363 201 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 CAPRIN2Q6IMN6 1127 aaKnown RBP15.84■□□□□ 0.13
VPS36-207ENST00000611132 TBC1D22AQ8WUA7 517 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 ZNF653Q96CK0 615 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 TSC22D3Q99576 134 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 MAK16Q9BXY0 300 aaKnown RBP15.84■□□□□ 0.13
VPS36-207ENST00000611132 CAPN6Q9Y6Q1 641 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 ZNF804BA4D1E1 1349 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 PLA2G12BQ9BX93 195 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 BATF3Q9NR55 127 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 BARHL2Q9NY43 387 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 ZNF148Q9UQR1 794 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 FAM237AA0A1B0GTK4 181 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
VPS36-207ENST00000611132 ODR4Q5SWX8 454 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 PALM2Q8IXS6 379 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 IWS1Q96ST2 819 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 C7orf25Q9BPX7 421 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 YIPF3Q9GZM5 350 aa15.84■□□□□ 0.13
VPS36-207ENST00000611132 FAM187AA6NFU0 413 aa15.83■□□□□ 0.13
VPS36-207ENST00000611132 HSPA1LP34931 641 aa15.83■□□□□ 0.13
VPS36-207ENST00000611132 MFSD14BQ5SR56 506 aa15.83■□□□□ 0.13
VPS36-207ENST00000611132 ZNF449Q6P9G9 518 aa15.83■□□□□ 0.13
VPS36-207ENST00000611132 CCDC89Q8N998 374 aa15.83■□□□□ 0.13
VPS36-207ENST00000611132 DDX39AO00148 427 aaKnown RBP15.83■□□□□ 0.13
VPS36-207ENST00000611132 MAPK13O15264 365 aa15.83■□□□□ 0.13
VPS36-207ENST00000611132 PRPF6O94906 941 aaKnown RBP15.83■□□□□ 0.13
VPS36-207ENST00000611132 PLEKP08567 350 aaPredicted RBP15.83■□□□□ 0.13
VPS36-207ENST00000611132 MAP7Q14244 749 aa15.83■□□□□ 0.13
VPS36-207ENST00000611132 XPO6Q96QU8 1125 aaKnown RBP15.83■□□□□ 0.13
VPS36-207ENST00000611132 DCP1AQ9NPI6 582 aaPredicted RBP15.83■□□□□ 0.13
VPS36-207ENST00000611132 ORC2Q13416 577 aaPredicted RBP15.83■□□□□ 0.12
VPS36-207ENST00000611132 GPATCH4Q5T3I0 446 aaKnown RBP15.83■□□□□ 0.12
VPS36-207ENST00000611132 WDR78Q5VTH9 848 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 CYB5D1Q6P9G0 228 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 ISCUQ9H1K1 167 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 SUSD4Q5VX71 490 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 CNBD1Q8NA66 436 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 MIPOL1Q8TD10 442 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 ECT2Q9H8V3 914 aa15.83■□□□□ 0.12
VPS36-207ENST00000611132 K7ENM7 598 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 MEIS1O00470 390 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 GNPATO15228 680 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 ORC4O43929 436 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 GRM4Q14833 912 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 CPVLQ9H3G5 476 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 ATP5HO75947 161 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 BMP6P22004 513 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 SDCCAG8Q86SQ7 713 aaPredicted RBP15.82■□□□□ 0.12
VPS36-207ENST00000611132 USP38Q8NB14 1042 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 FAM212AQ96EL1 285 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 TMEM47Q9BQJ4 181 aa15.82■□□□□ 0.12
VPS36-207ENST00000611132 FAM167BQ9BTA0 163 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms