RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 CCDC186Q7Z3E2 898 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 ABRAQ8N0Z2 381 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 ADSSL1Q8N142 457 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 GJA10Q969M2 543 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 CDK5RAP3Q96JB5 506 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 MAML3Q96JK9 1138 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 AGBL1Q96MI9 1066 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 PLIN2Q99541 437 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 TEX13BQ9BXU2 312 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 NT5C3AQ9H0P0 336 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 MAP3K20Q9NYL2 800 aaKnown RBP10.51□□□□□ -0.73
VPS25-205ENST00000590339 DDX20Q9UHI6 824 aaKnown RBP10.51□□□□□ -0.73
VPS25-205ENST00000590339 NRBP1Q9UHY1 535 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 PCDHA12Q9UN75 941 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 CTNND2Q9UQB3 1225 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 GDAQ9Y2T3 454 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 STK24Q9Y6E0 443 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 DOCK3Q8IZD9 2030 aa10.51□□□□□ -0.73
VPS25-205ENST00000590339 PVALEFA0A1B0GWK0 134 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 MYMKA6NI61 221 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 NFIBO00712 420 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 TNRC18O15417 2968 aaPredicted RBP10.5□□□□□ -0.73
VPS25-205ENST00000590339 CCT6AP40227 531 aaKnown RBP10.5□□□□□ -0.73
VPS25-205ENST00000590339 PPP1R2P41236 205 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 OAZ1P54368 228 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 GSDMDP57764 484 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 ASIC1P78348 528 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 SETQ01105 290 aaPredicted RBP10.5□□□□□ -0.73
VPS25-205ENST00000590339 MCM6Q14566 821 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 HABP4Q5JVS0 413 aaKnown RBP10.5□□□□□ -0.73
VPS25-205ENST00000590339 OLFML2BQ68BL8 750 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 HAUS3Q68CZ6 603 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 UNC13DQ70J99 1090 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 SV2BQ7L1I2 683 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 NIPA1Q7RTP0 329 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 VSTM4Q8IW00 320 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 C7orf61Q8IZ16 206 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 SLC5A5Q92911 643 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 HOMER2Q9NSB8 354 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 COL20A1Q9P218 1284 aa10.5□□□□□ -0.73
VPS25-205ENST00000590339 A0A1B0GTH6 734 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 POTEB3A0JP26 581 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 ATP2A1O14983 1001 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 MED24O75448 989 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 PSMD10O75832 226 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 CYBAP13498 195 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 SYN1P17600 705 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 COPB2P35606 906 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 PRCPP42785 496 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 UBASH3AP57075 661 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 PPP2R5CQ13362 524 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 DHX8Q14562 1220 aaKnown RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 ZNF792Q3KQV3 632 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 GJC2Q5T442 439 aaPredicted RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 KLHL10Q6JEL2 608 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 POTEBQ6S5H4 581 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 B3GNT9Q6UX72 402 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 FCHSD1Q86WN1 690 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 MCF2L2Q86YR7 1114 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 DRC7Q8IY82 874 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 ANKRD35Q8N283 1001 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 KCTD17Q8N5Z5 321 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 CCDC150Q8NCX0 1101 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 KIAA1524Q8TCG1 905 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 CACTINQ8WUQ7 758 aaKnown RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 NELFBQ8WX92 580 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 CCDC47Q96A33 483 aaKnown RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 ZNF830Q96NB3 372 aaPredicted RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 NAP1L5Q96NT1 182 aaPredicted RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 LRRC27Q9C0I9 530 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 SENP6Q9GZR1 1112 aaPredicted RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 MAF1Q9H063 256 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 SAMSN1Q9NSI8 373 aaKnown RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 SPTLC3Q9NUV7 552 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 EXOC1Q9NV70 894 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 ZMYND8Q9ULU4 1186 aaPredicted RBP10.49□□□□□ -0.73
VPS25-205ENST00000590339 PYCARDQ9ULZ3 195 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 BRCA2P51587 3418 aa10.49□□□□□ -0.73
VPS25-205ENST00000590339 MKI67P46013 3256 aaKnown RBP10.48□□□□□ -0.73
VPS25-205ENST00000590339 FRMD3A2A2Y4 597 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 MEIS1O00470 390 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 MARCH6O60337 910 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 MSCO60682 206 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 SERPINC1P01008 464 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 SPATA31C1P0DKV0 1188 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 ALAS1P13196 640 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 RPA1P27694 616 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 PBX1P40424 430 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 ATN1P54259 1190 aaPredicted RBP10.48□□□□□ -0.73
VPS25-205ENST00000590339 STX17P56962 302 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 CCZ1BP86790 482 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 CCZ1P86791 482 aaPredicted RBP10.48□□□□□ -0.73
VPS25-205ENST00000590339 SPAG1Q07617 926 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 PDE4DQ08499 809 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 LRMPQ12912 555 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 CEP55Q53EZ4 464 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 MUM1L1Q5H9M0 696 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 TTI2Q6NXR4 508 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms