RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 TELO2Q9Y4R8 837 aa34.15■■■■□ 3.06
CTCF-203ENST00000566078 FARP2O94887 1054 aaPredicted RBP34.14■■■■□ 3.06
CTCF-203ENST00000566078 SNAI1O95863 264 aaPredicted RBP34.14■■■■□ 3.06
CTCF-203ENST00000566078 QARSP47897 775 aaKnown RBP34.14■■■■□ 3.06
CTCF-203ENST00000566078 TTLL4Q14679 1199 aa34.14■■■■□ 3.06
CTCF-203ENST00000566078 MSL3Q8N5Y2 521 aaKnown RBP34.14■■■■□ 3.06
CTCF-203ENST00000566078 CFHR5Q9BXR6 569 aa34.14■■■■□ 3.06
CTCF-203ENST00000566078 ARHGAP39Q9C0H5 1083 aa34.14■■■■□ 3.06
CTCF-203ENST00000566078 KATNBL1Q9H079 304 aa34.14■■■■□ 3.06
CTCF-203ENST00000566078 ZSWIM4Q9H7M6 989 aa34.14■■■■□ 3.06
CTCF-203ENST00000566078 RNF186Q9NXI6 227 aa34.14■■■■□ 3.06
CTCF-203ENST00000566078 MYMKA6NI61 221 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 TRPA1O75762 1119 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 EYA4O95677 639 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 RPN1P04843 607 aaKnown RBP34.13■■■■□ 3.05
CTCF-203ENST00000566078 PSAPP07602 524 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 PSMC4P43686 418 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 DPCR1Q3MIW9 517 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 C11orf57Q6ZUT1 292 aaPredicted RBP34.13■■■■□ 3.05
CTCF-203ENST00000566078 TRIML1Q8N9V2 468 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 PIGOQ8TEQ8 1089 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 NACC1Q96RE7 527 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 APBA2Q99767 749 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 GJD2Q9UKL4 321 aa34.13■■■■□ 3.05
CTCF-203ENST00000566078 CYP2B6P20813 491 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 SLC12A3P55017 1021 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 ASIC1P78348 528 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 MORC3Q14149 939 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 UGCGQ16739 394 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 TAPT1Q6NXT6 567 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 CCDC62Q6P9F0 684 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 TXNP10599 105 aaKnown RBP34.12■■■■□ 3.05
CTCF-203ENST00000566078 METTL7BQ6UX53 244 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 GPBP1Q86WP2 473 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 RNF214Q8ND24 703 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 TRIM47Q96LD4 638 aa34.12■■■■□ 3.05
CTCF-203ENST00000566078 PSMC5P62195 406 aa34.11■■■■□ 3.05
CTCF-203ENST00000566078 MIS18BP1Q6P0N0 1132 aa34.11■■■■□ 3.05
CTCF-203ENST00000566078 ABHD15Q6UXT9 468 aa34.11■■■■□ 3.05
CTCF-203ENST00000566078 SYT2Q8N9I0 419 aaPredicted RBP34.11■■■■□ 3.05
CTCF-203ENST00000566078 BHMT2Q9H2M3 363 aa34.11■■■■□ 3.05
CTCF-203ENST00000566078 MLXIPQ9HAP2 919 aa34.11■■■■□ 3.05
CTCF-203ENST00000566078 RMND1Q9NWS8 449 aa34.11■■■■□ 3.05
CTCF-203ENST00000566078 FLRT1Q9NZU1 646 aa34.11■■■■□ 3.05
CTCF-203ENST00000566078 KLRC4O43908 158 aa34.1■■■■□ 3.05
CTCF-203ENST00000566078 SUPT20HL2P0C7V6 817 aa34.1■■■■□ 3.05
CTCF-203ENST00000566078 DYMQ7RTS9 669 aa34.1■■■■□ 3.05
CTCF-203ENST00000566078 GABBR1Q9UBS5 961 aa34.1■■■■□ 3.05
CTCF-203ENST00000566078 RBM47A0AV96 593 aaKnown RBP34.09■■■■□ 3.05
CTCF-203ENST00000566078 ZBTB39O15060 712 aa34.09■■■■□ 3.05
CTCF-203ENST00000566078 BMP6P22004 513 aa34.09■■■■□ 3.05
CTCF-203ENST00000566078 SP3Q02447 781 aa34.09■■■■□ 3.05
CTCF-203ENST00000566078 CELF3Q5SZQ8 465 aaKnown RBP34.09■■■■□ 3.05
CTCF-203ENST00000566078 DDX12PQ92771 950 aa34.09■■■■□ 3.05
CTCF-203ENST00000566078 ABHD16BQ9H3Z7 469 aa34.09■■■■□ 3.05
CTCF-203ENST00000566078 LYPLA2O95372 231 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 CCL14Q16627 93 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 COPS5Q92905 334 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 ZHX1Q9UKY1 873 aaPredicted RBP34.08■■■■□ 3.05
CTCF-203ENST00000566078 ATG7O95352 703 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 CYP11B2P19099 503 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 ACVR2BQ13705 512 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 KMT5BQ4FZB7 885 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 TMEM63BQ5T3F8 832 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 OLFML2BQ68BL8 750 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 SWSAP1Q6NVH7 229 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 CNNM4Q6P4Q7 775 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 CCDC60Q8IWA6 550 aaPredicted RBP34.08■■■■□ 3.05
CTCF-203ENST00000566078 DHX37Q8IY37 1157 aaKnown RBP34.08■■■■□ 3.05
CTCF-203ENST00000566078 FAM200AQ8TCP9 573 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 ATP6V0A1Q93050 837 aa34.08■■■■□ 3.05
CTCF-203ENST00000566078 CAVIN2O95810 425 aa34.07■■■■□ 3.04
CTCF-203ENST00000566078 KCNB1Q14721 858 aa34.07■■■■□ 3.04
CTCF-203ENST00000566078 KIF22Q14807 665 aa34.07■■■■□ 3.04
CTCF-203ENST00000566078 C4orf19Q8IY42 314 aa34.07■■■■□ 3.04
CTCF-203ENST00000566078 CCDC47Q96A33 483 aaKnown RBP34.07■■■■□ 3.04
CTCF-203ENST00000566078 GRPEL1Q9HAV7 217 aa34.07■■■■□ 3.04
CTCF-203ENST00000566078 BMP2KQ9NSY1 1161 aaPredicted RBP34.07■■■■□ 3.04
CTCF-203ENST00000566078 BACH1O14867 736 aa34.06■■■■□ 3.04
CTCF-203ENST00000566078 ADCYAP1R1P41586 468 aa34.06■■■■□ 3.04
CTCF-203ENST00000566078 ZNF165P49910 485 aa34.06■■■■□ 3.04
CTCF-203ENST00000566078 NAT10Q9H0A0 1025 aaKnown RBP34.06■■■■□ 3.04
CTCF-203ENST00000566078 IGSF9BQ9UPX0 1349 aa34.06■■■■□ 3.04
CTCF-203ENST00000566078 GSTTP1A0A1W2PQM5 241 aa34.05■■■■□ 3.04
CTCF-203ENST00000566078 KRT18P05783 430 aaKnown RBP34.05■■■■□ 3.04
CTCF-203ENST00000566078 ARSHQ5FYA8 562 aa34.05■■■■□ 3.04
CTCF-203ENST00000566078 UNC13DQ70J99 1090 aa34.05■■■■□ 3.04
CTCF-203ENST00000566078 DNAJC19Q96DA6 116 aa34.05■■■■□ 3.04
CTCF-203ENST00000566078 EXOC1Q9NV70 894 aa34.05■■■■□ 3.04
CTCF-203ENST00000566078 NPHP3-ACAD11A0A0J9YXS1 232 aa34.04■■■■□ 3.04
CTCF-203ENST00000566078 DKC1O60832 514 aaKnown RBP eCLIP34.04■■■■□ 3.04
CTCF-203ENST00000566078 YWHABP31946 246 aaKnown RBP34.04■■■■□ 3.04
CTCF-203ENST00000566078 RUSC1Q9BVN2 902 aa34.04■■■■□ 3.04
CTCF-203ENST00000566078 CBX8Q9HC52 389 aa34.04■■■■□ 3.04
CTCF-203ENST00000566078 GABRQQ9UN88 632 aa34.04■■■■□ 3.04
CTCF-203ENST00000566078 ARHGEF35A5YM69 484 aa34.04■■■■□ 3.04
CTCF-203ENST00000566078 NOP56O00567 594 aaKnown RBP34.04■■■■□ 3.04
CTCF-203ENST00000566078 RHOBTB3O94955 611 aa34.04■■■■□ 3.04
CTCF-203ENST00000566078 IDEP14735 1019 aa34.04■■■■□ 3.04
CTCF-203ENST00000566078 SPATA33Q96N06 139 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms